Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 KRT18P24-201ENST00000344739 1156 ntBASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 AL049796.1-201ENST00000565336 1766 ntBASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
SMIM4Q8WVI0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 SNX5-217ENST00000606557 1087 ntBASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMIM4Q8WVI0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 RNF126P1-201ENST00000567452 1320 ntBASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 AP005212.1-201ENST00000581547 1997 ntBASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMIM4Q8WVI0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMIM4Q8WVI0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
SMIM4Q8WVI0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMIM4Q8WVI0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.27■□□□□ 0.51
SMIM4Q8WVI0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMIM4Q8WVI0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SMIM4Q8WVI0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.26■□□□□ 0.51
SMIM4Q8WVI0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 AC129492.7-201ENST00000622992 756 ntBASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.25■□□□□ 0.51
SMIM4Q8WVI0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms