Protein–RNA interactions for Protein: Q8TF40

FNIP1, Folliculin-interacting protein 1, humanhuman

Predictions only

Length 1,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNIP1Q8TF40 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
FNIP1Q8TF40 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
FNIP1Q8TF40 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 AP006587.3-201ENST00000525742 1516 ntBASIC22.39■■□□□ 1.17
FNIP1Q8TF40 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FNIP1Q8TF40 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 MIR572-201ENST00000384983 95 ntBASIC22.38■■□□□ 1.17
FNIP1Q8TF40 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FNIP1Q8TF40 AC007375.3-201ENST00000600936 2314 ntBASIC22.37■■□□□ 1.17
FNIP1Q8TF40 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 AC003102.1-202ENST00000563394 1796 ntBASIC22.37■■□□□ 1.17
FNIP1Q8TF40 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
FNIP1Q8TF40 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNIP1Q8TF40 AC026310.3-201ENST00000625186 2373 ntBASIC22.35■■□□□ 1.17
FNIP1Q8TF40 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.35■■□□□ 1.17
FNIP1Q8TF40 AC009237.3-201ENST00000393279 1427 ntBASIC22.35■■□□□ 1.17
FNIP1Q8TF40 AC105233.4-201ENST00000642045 216 ntBASIC22.35■■□□□ 1.17
FNIP1Q8TF40 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNIP1Q8TF40 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.35■■□□□ 1.17
FNIP1Q8TF40 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
FNIP1Q8TF40 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNIP1Q8TF40 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
FNIP1Q8TF40 Z98882.1-201ENST00000622160 2253 ntBASIC22.33■■□□□ 1.16
FNIP1Q8TF40 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
FNIP1Q8TF40 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FNIP1Q8TF40 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
FNIP1Q8TF40 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.32■■□□□ 1.16
FNIP1Q8TF40 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms