Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC29.82■■■□□ 2.36
TMC1Q8TDI8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC29.82■■■□□ 2.36
TMC1Q8TDI8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TMC1Q8TDI8 AP004607.7-201ENST00000527152 1677 ntBASIC29.82■■■□□ 2.36
TMC1Q8TDI8 GUSBP5-202ENST00000510805 1989 ntBASIC29.81■■■□□ 2.36
TMC1Q8TDI8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
TMC1Q8TDI8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TMC1Q8TDI8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC29.81■■■□□ 2.36
TMC1Q8TDI8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 OR7E47P-201ENST00000546390 1422 ntBASIC29.8■■■□□ 2.36
TMC1Q8TDI8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TMC1Q8TDI8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 AC087742.1-201ENST00000575880 1738 ntBASIC29.79■■■□□ 2.36
TMC1Q8TDI8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
TMC1Q8TDI8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TMC1Q8TDI8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TMC1Q8TDI8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TMC1Q8TDI8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
TMC1Q8TDI8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
TMC1Q8TDI8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TMC1Q8TDI8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TMC1Q8TDI8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TMC1Q8TDI8 KRT87P-202ENST00000534226 1464 ntBASIC29.77■■■□□ 2.36
TMC1Q8TDI8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC29.77■■■□□ 2.36
TMC1Q8TDI8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
TMC1Q8TDI8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC29.77■■■□□ 2.36
TMC1Q8TDI8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC29.77■■■□□ 2.36
TMC1Q8TDI8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC29.77■■■□□ 2.36
TMC1Q8TDI8 AC104187.1-201ENST00000607510 612 ntBASIC29.77■■■□□ 2.36
TMC1Q8TDI8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
TMC1Q8TDI8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
TMC1Q8TDI8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TMC1Q8TDI8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
TMC1Q8TDI8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
TMC1Q8TDI8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
TMC1Q8TDI8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC29.76■■■□□ 2.35
TMC1Q8TDI8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TMC1Q8TDI8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TMC1Q8TDI8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TMC1Q8TDI8 EP400NL-214ENST00000641289 2402 ntBASIC29.76■■■□□ 2.35
TMC1Q8TDI8 AC055733.4-201ENST00000638462 1354 ntBASIC29.76■■■□□ 2.35
TMC1Q8TDI8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
TMC1Q8TDI8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
TMC1Q8TDI8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
TMC1Q8TDI8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC29.75■■■□□ 2.35
TMC1Q8TDI8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TMC1Q8TDI8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC29.75■■■□□ 2.35
TMC1Q8TDI8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TMC1Q8TDI8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
TMC1Q8TDI8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TMC1Q8TDI8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TMC1Q8TDI8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
TMC1Q8TDI8 AC137767.1-201ENST00000602918 1920 ntBASIC29.74■■■□□ 2.35
TMC1Q8TDI8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC29.74■■■□□ 2.35
TMC1Q8TDI8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TMC1Q8TDI8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
TMC1Q8TDI8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 AC127496.7-201ENST00000625110 1798 ntBASIC29.73■■■□□ 2.35
TMC1Q8TDI8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 CDCA4P2-201ENST00000441182 718 ntBASIC29.73■■■□□ 2.35
TMC1Q8TDI8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 BID-214ENST00000617586 542 ntTSL 5 BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 AC073111.5-205ENST00000641717 521 ntBASIC29.73■■■□□ 2.35
TMC1Q8TDI8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TMC1Q8TDI8 AC079834.2-201ENST00000609776 1949 ntBASIC29.73■■■□□ 2.35
TMC1Q8TDI8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
TMC1Q8TDI8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TMC1Q8TDI8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC29.72■■■□□ 2.35
TMC1Q8TDI8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
TMC1Q8TDI8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.72■■■□□ 2.35
TMC1Q8TDI8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC29.72■■■□□ 2.35
TMC1Q8TDI8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TMC1Q8TDI8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms