Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FNDC9Q8TBE3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FNDC9Q8TBE3 AP004607.7-201ENST00000527152 1677 ntBASIC19.24■□□□□ 0.67
FNDC9Q8TBE3 AC005224.4-201ENST00000583262 1652 ntBASIC19.24■□□□□ 0.67
FNDC9Q8TBE3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FNDC9Q8TBE3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FNDC9Q8TBE3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 AC139530.1-201ENST00000575312 1977 ntBASIC19.23■□□□□ 0.67
FNDC9Q8TBE3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC9Q8TBE3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
FNDC9Q8TBE3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 AC079140.4-201ENST00000507448 529 ntBASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 AC022517.1-201ENST00000592429 346 ntBASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.2■□□□□ 0.66
FNDC9Q8TBE3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 KRT18P61-201ENST00000585825 1298 ntBASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC9Q8TBE3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 AL034346.1-201ENST00000568244 1277 ntBASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.18■□□□□ 0.66
FNDC9Q8TBE3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 640 ms