Protein–RNA interactions for Protein: Q8NHU3

SGMS2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2Q8NHU3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGMS2Q8NHU3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGMS2Q8NHU3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.57■□□□□ 0.4
SGMS2Q8NHU3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 ECEL1P1-201ENST00000373592 1742 ntBASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 IGHV3-19-201ENST00000521488 291 ntBASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 AL137060.1-201ENST00000618151 2648 ntBASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SGMS2Q8NHU3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 AL355802.2-201ENST00000402069 882 ntBASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 AC026185.1-201ENST00000445748 174 ntBASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SGMS2Q8NHU3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 AC006455.2-201ENST00000429931 906 ntBASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SGMS2Q8NHU3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 AC006015.1-201ENST00000429970 570 ntBASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 RAP2CP1-201ENST00000605103 478 ntBASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 AL109923.1-201ENST00000618799 583 ntBASIC17.53■□□□□ 0.4
SGMS2Q8NHU3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 CDCA4P2-201ENST00000441182 718 ntBASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 AC006970.2-201ENST00000450065 779 ntBASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 CD99P1-205ENST00000527459 561 ntBASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 AC073111.5-205ENST00000641717 521 ntBASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SGMS2Q8NHU3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SGMS2Q8NHU3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SGMS2Q8NHU3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SGMS2Q8NHU3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms