Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PSD4Q8NDX1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.08■□□□□ 0.81
PSD4Q8NDX1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.08■□□□□ 0.81
PSD4Q8NDX1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PSD4Q8NDX1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.08■□□□□ 0.81
PSD4Q8NDX1 AC087239.1-201ENST00000622671 572 ntBASIC20.08■□□□□ 0.81
PSD4Q8NDX1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
PSD4Q8NDX1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PSD4Q8NDX1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 AL031602.1-201ENST00000633169 911 ntBASIC20.07■□□□□ 0.8
PSD4Q8NDX1 AC105233.4-201ENST00000642045 216 ntBASIC20.07■□□□□ 0.8
PSD4Q8NDX1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.07■□□□□ 0.8
PSD4Q8NDX1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PSD4Q8NDX1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 RNF165-205ENST00000588679 2904 ntBASIC20.05■□□□□ 0.8
PSD4Q8NDX1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSD4Q8NDX1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 AC123595.1-201ENST00000440769 1046 ntBASIC20.04■□□□□ 0.8
PSD4Q8NDX1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 AC010141.3-201ENST00000456659 717 ntBASIC20.04■□□□□ 0.8
PSD4Q8NDX1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.04■□□□□ 0.8
PSD4Q8NDX1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 AL162430.1-201ENST00000480705 870 ntBASIC20.03■□□□□ 0.8
PSD4Q8NDX1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 AC104564.3-201ENST00000582367 638 ntBASIC20.03■□□□□ 0.8
PSD4Q8NDX1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.03■□□□□ 0.8
PSD4Q8NDX1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms