Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 NCF1B-203ENST00000435988 1254 ntBASIC23.29■■□□□ 1.32
RNF169Q8NCN4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF169Q8NCN4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF169Q8NCN4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF169Q8NCN4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RNF169Q8NCN4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF169Q8NCN4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF169Q8NCN4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.27■■□□□ 1.32
RNF169Q8NCN4 MYCNOS-205ENST00000641950 531 ntBASIC23.27■■□□□ 1.32
RNF169Q8NCN4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF169Q8NCN4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RNF169Q8NCN4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RNF169Q8NCN4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF169Q8NCN4 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.27■■□□□ 1.32
RNF169Q8NCN4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
RNF169Q8NCN4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 GPX1P1-201ENST00000388829 606 ntBASIC23.26■■□□□ 1.31
RNF169Q8NCN4 AC007322.1-201ENST00000426983 750 ntBASIC23.26■■□□□ 1.31
RNF169Q8NCN4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF169Q8NCN4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 DUX4L16-201ENST00000555130 1264 ntBASIC23.25■■□□□ 1.31
RNF169Q8NCN4 AL034346.1-201ENST00000568244 1277 ntBASIC23.25■■□□□ 1.31
RNF169Q8NCN4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF169Q8NCN4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF169Q8NCN4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
RNF169Q8NCN4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF169Q8NCN4 AC005181.1-201ENST00000604782 1256 ntBASIC23.23■■□□□ 1.31
RNF169Q8NCN4 AL050303.2-201ENST00000619798 666 ntBASIC23.23■■□□□ 1.31
RNF169Q8NCN4 AC231657.2-201ENST00000624556 255 ntBASIC23.23■■□□□ 1.31
RNF169Q8NCN4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF169Q8NCN4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF169Q8NCN4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF169Q8NCN4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 AC010141.2-201ENST00000452426 721 ntBASIC23.22■■□□□ 1.31
RNF169Q8NCN4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF169Q8NCN4 AC087742.1-201ENST00000575880 1738 ntBASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms