Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM116Q8NCL8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 AC006455.2-201ENST00000429931 906 ntBASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 AC092171.4-201ENST00000609130 632 ntBASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM116Q8NCL8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 AL512631.2-201ENST00000604634 923 ntBASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 AC099791.2-201ENST00000605725 427 ntBASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 AC131212.1-201ENST00000613771 668 ntBASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM116Q8NCL8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 OR7E47P-201ENST00000546390 1422 ntBASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM116Q8NCL8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 OR2I1P-207ENST00000453522 948 ntBASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 MIR3181-201ENST00000578512 73 ntBASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM116Q8NCL8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
TMEM116Q8NCL8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms