Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EFCAB3Q8N7B9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EFCAB3Q8N7B9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.08■□□□□ 0.97
EFCAB3Q8N7B9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EFCAB3Q8N7B9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
EFCAB3Q8N7B9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.08■□□□□ 0.97
EFCAB3Q8N7B9 AL162430.1-201ENST00000480705 870 ntBASIC21.08■□□□□ 0.97
EFCAB3Q8N7B9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
EFCAB3Q8N7B9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.08■□□□□ 0.97
EFCAB3Q8N7B9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.08■□□□□ 0.97
EFCAB3Q8N7B9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
EFCAB3Q8N7B9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EFCAB3Q8N7B9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.08■□□□□ 0.96
EFCAB3Q8N7B9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EFCAB3Q8N7B9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
EFCAB3Q8N7B9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 DUX4L4-201ENST00000566884 1269 ntBASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 AC009086.3-201ENST00000623486 1008 ntBASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EFCAB3Q8N7B9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 AC241377.3-202ENST00000626088 1088 ntBASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 AC241585.3-202ENST00000628937 1088 ntBASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 AC245100.8-202ENST00000629247 1058 ntBASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCAB3Q8N7B9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 AC099791.2-201ENST00000605725 427 ntBASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 AC087623.3-201ENST00000607047 1098 ntBASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.05■□□□□ 0.96
EFCAB3Q8N7B9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFCAB3Q8N7B9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.04■□□□□ 0.96
EFCAB3Q8N7B9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
EFCAB3Q8N7B9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFCAB3Q8N7B9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EFCAB3Q8N7B9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EFCAB3Q8N7B9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EFCAB3Q8N7B9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFCAB3Q8N7B9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFCAB3Q8N7B9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EFCAB3Q8N7B9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
EFCAB3Q8N7B9 AC006455.2-201ENST00000429931 906 ntBASIC21.03■□□□□ 0.96
EFCAB3Q8N7B9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EFCAB3Q8N7B9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EFCAB3Q8N7B9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.03■□□□□ 0.96
EFCAB3Q8N7B9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 RASA4CP-201ENST00000424092 1398 ntBASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 MIR4767-201ENST00000582827 78 ntBASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 CA15P2-201ENST00000611168 834 ntBASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 AL157384.1-201ENST00000445995 2473 ntBASIC21.02■□□□□ 0.96
EFCAB3Q8N7B9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFCAB3Q8N7B9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms