Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AF106564.1-201ENST00000607058 2553 ntBASIC20.88■□□□□ 0.93
CPSF7Q8N684 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF7Q8N684 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF7Q8N684 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF7Q8N684 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF7Q8N684 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF7Q8N684 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF7Q8N684 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CPSF7Q8N684 PBX2P1-201ENST00000493219 1291 ntBASIC20.87■□□□□ 0.93
CPSF7Q8N684 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
CPSF7Q8N684 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF7Q8N684 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF7Q8N684 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF7Q8N684 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF7Q8N684 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF7Q8N684 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF7Q8N684 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.86■□□□□ 0.93
CPSF7Q8N684 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF7Q8N684 UNC93B3-201ENST00000308076 687 ntBASIC20.86■□□□□ 0.93
CPSF7Q8N684 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF7Q8N684 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.86■□□□□ 0.93
CPSF7Q8N684 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.86■□□□□ 0.93
CPSF7Q8N684 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.86■□□□□ 0.93
CPSF7Q8N684 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.86■□□□□ 0.93
CPSF7Q8N684 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF7Q8N684 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CPSF7Q8N684 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF7Q8N684 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.86■□□□□ 0.93
CPSF7Q8N684 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CPSF7Q8N684 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.85■□□□□ 0.93
CPSF7Q8N684 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.85■□□□□ 0.93
CPSF7Q8N684 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF7Q8N684 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF7Q8N684 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF7Q8N684 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CPSF7Q8N684 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.85■□□□□ 0.93
CPSF7Q8N684 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CPSF7Q8N684 AC106739.1-201ENST00000617035 715 ntBASIC20.85■□□□□ 0.93
CPSF7Q8N684 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF7Q8N684 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CPSF7Q8N684 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF7Q8N684 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF7Q8N684 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.85■□□□□ 0.93
CPSF7Q8N684 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.84■□□□□ 0.93
CPSF7Q8N684 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CPSF7Q8N684 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.84■□□□□ 0.93
CPSF7Q8N684 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CPSF7Q8N684 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.84■□□□□ 0.93
CPSF7Q8N684 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 LINC01521-201ENST00000504184 1943 ntBASIC20.84■□□□□ 0.93
CPSF7Q8N684 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF7Q8N684 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF7Q8N684 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF7Q8N684 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF7Q8N684 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CPSF7Q8N684 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.83■□□□□ 0.93
CPSF7Q8N684 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF7Q8N684 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.83■□□□□ 0.93
CPSF7Q8N684 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF7Q8N684 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.83■□□□□ 0.93
CPSF7Q8N684 AC133561.4-201ENST00000566112 224 ntBASIC20.83■□□□□ 0.93
CPSF7Q8N684 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.83■□□□□ 0.93
CPSF7Q8N684 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CPSF7Q8N684 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF7Q8N684 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CPSF7Q8N684 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF7Q8N684 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.83■□□□□ 0.92
CPSF7Q8N684 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF7Q8N684 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CPSF7Q8N684 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.83■□□□□ 0.92
CPSF7Q8N684 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CPSF7Q8N684 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF7Q8N684 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF7Q8N684 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CPSF7Q8N684 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.82■□□□□ 0.92
CPSF7Q8N684 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.82■□□□□ 0.92
CPSF7Q8N684 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF7Q8N684 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF7Q8N684 AL136162.1-201ENST00000607711 1078 ntBASIC20.82■□□□□ 0.92
CPSF7Q8N684 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.82■□□□□ 0.92
CPSF7Q8N684 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CPSF7Q8N684 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CPSF7Q8N684 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF7Q8N684 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF7Q8N684 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF7Q8N684 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.81■□□□□ 0.92
CPSF7Q8N684 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF7Q8N684 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF7Q8N684 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CPSF7Q8N684 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF7Q8N684 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms