Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 AC123595.1-201ENST00000440769 1046 ntBASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 LINC02228-203ENST00000641970 1355 ntBASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB42Q8N4Z0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB42Q8N4Z0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
RAB42Q8N4Z0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 AC005224.4-201ENST00000583262 1652 ntBASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB42Q8N4Z0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB42Q8N4Z0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RAB42Q8N4Z0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB42Q8N4Z0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB42Q8N4Z0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB42Q8N4Z0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB42Q8N4Z0 AP006587.3-201ENST00000525742 1516 ntBASIC20.77■□□□□ 0.92
RAB42Q8N4Z0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB42Q8N4Z0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB42Q8N4Z0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB42Q8N4Z0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB42Q8N4Z0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB42Q8N4Z0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB42Q8N4Z0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RAB42Q8N4Z0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB42Q8N4Z0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB42Q8N4Z0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB42Q8N4Z0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB42Q8N4Z0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms