Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF39Q8N4T4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF39Q8N4T4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 KRT87P-202ENST00000534226 1464 ntBASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 AC104564.3-201ENST00000582367 638 ntBASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 AC026471.6-201ENST00000622954 1905 ntBASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ARHGEF39Q8N4T4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.27■□□□□ 0.83
ARHGEF39Q8N4T4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
ARHGEF39Q8N4T4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ARHGEF39Q8N4T4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ARHGEF39Q8N4T4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.26■□□□□ 0.83
ARHGEF39Q8N4T4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.26■□□□□ 0.83
ARHGEF39Q8N4T4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.26■□□□□ 0.83
ARHGEF39Q8N4T4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 AC022517.1-201ENST00000592429 346 ntBASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 FAM99A-202ENST00000538190 1989 ntBASIC20.25■□□□□ 0.83
ARHGEF39Q8N4T4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 AC092437.1-201ENST00000624794 1048 ntBASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF39Q8N4T4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 AC003102.1-202ENST00000563394 1796 ntBASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.23■□□□□ 0.83
ARHGEF39Q8N4T4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms