Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
NME8Q8N427 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.59■■□□□ 1.37
NME8Q8N427 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NME8Q8N427 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NME8Q8N427 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
NME8Q8N427 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.59■■□□□ 1.37
NME8Q8N427 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
NME8Q8N427 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NME8Q8N427 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.58■■□□□ 1.37
NME8Q8N427 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.58■■□□□ 1.37
NME8Q8N427 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
NME8Q8N427 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NME8Q8N427 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NME8Q8N427 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.58■■□□□ 1.37
NME8Q8N427 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.58■■□□□ 1.37
NME8Q8N427 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.58■■□□□ 1.37
NME8Q8N427 EEF1DP3-203ENST00000566025 782 ntBASIC23.58■■□□□ 1.37
NME8Q8N427 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
NME8Q8N427 AC137767.1-201ENST00000602918 1920 ntBASIC23.58■■□□□ 1.37
NME8Q8N427 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NME8Q8N427 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NME8Q8N427 AP006587.3-201ENST00000525742 1516 ntBASIC23.58■■□□□ 1.36
NME8Q8N427 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NME8Q8N427 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NME8Q8N427 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
NME8Q8N427 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
NME8Q8N427 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NME8Q8N427 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.57■■□□□ 1.36
NME8Q8N427 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.57■■□□□ 1.36
NME8Q8N427 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NME8Q8N427 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NME8Q8N427 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
NME8Q8N427 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.57■■□□□ 1.36
NME8Q8N427 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.57■■□□□ 1.36
NME8Q8N427 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.57■■□□□ 1.36
NME8Q8N427 AC053503.5-201ENST00000601508 636 ntBASIC23.57■■□□□ 1.36
NME8Q8N427 AL109923.1-201ENST00000618799 583 ntBASIC23.57■■□□□ 1.36
NME8Q8N427 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.57■■□□□ 1.36
NME8Q8N427 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NME8Q8N427 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NME8Q8N427 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NME8Q8N427 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NME8Q8N427 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
NME8Q8N427 MIR663A-201ENST00000385250 93 ntBASIC23.56■■□□□ 1.36
NME8Q8N427 GPX1P1-201ENST00000388829 606 ntBASIC23.56■■□□□ 1.36
NME8Q8N427 AC007322.1-201ENST00000426983 750 ntBASIC23.56■■□□□ 1.36
NME8Q8N427 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.56■■□□□ 1.36
NME8Q8N427 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.56■■□□□ 1.36
NME8Q8N427 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NME8Q8N427 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.56■■□□□ 1.36
NME8Q8N427 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.56■■□□□ 1.36
NME8Q8N427 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NME8Q8N427 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NME8Q8N427 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NME8Q8N427 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NME8Q8N427 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NME8Q8N427 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NME8Q8N427 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NME8Q8N427 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
NME8Q8N427 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
NME8Q8N427 SLC7A5P1-201ENST00000568957 537 ntBASIC23.55■■□□□ 1.36
NME8Q8N427 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.55■■□□□ 1.36
NME8Q8N427 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.55■■□□□ 1.36
NME8Q8N427 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NME8Q8N427 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NME8Q8N427 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NME8Q8N427 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NME8Q8N427 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
NME8Q8N427 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NME8Q8N427 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NME8Q8N427 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
NME8Q8N427 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NME8Q8N427 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NME8Q8N427 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NME8Q8N427 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.53■■□□□ 1.36
NME8Q8N427 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.53■■□□□ 1.36
NME8Q8N427 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NME8Q8N427 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NME8Q8N427 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
NME8Q8N427 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.53■■□□□ 1.36
NME8Q8N427 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NME8Q8N427 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.53■■□□□ 1.36
NME8Q8N427 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
NME8Q8N427 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.53■■□□□ 1.36
NME8Q8N427 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NME8Q8N427 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NME8Q8N427 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NME8Q8N427 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.52■■□□□ 1.36
NME8Q8N427 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NME8Q8N427 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NME8Q8N427 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.52■■□□□ 1.36
NME8Q8N427 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NME8Q8N427 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
NME8Q8N427 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.52■■□□□ 1.36
NME8Q8N427 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.52■■□□□ 1.36
NME8Q8N427 AL121832.2-201ENST00000610979 668 ntBASIC23.52■■□□□ 1.36
NME8Q8N427 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NME8Q8N427 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.52■■□□□ 1.36
NME8Q8N427 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.52■■□□□ 1.36
NME8Q8N427 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms