Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC068473.5-201ENST00000616428 2072 ntBASIC21.83■■□□□ 1.08
SYNPOQ8N3V7 DUSP8P5-201ENST00000422884 1815 ntBASIC21.83■■□□□ 1.08
SYNPOQ8N3V7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 MIR4758-201ENST00000577688 71 ntBASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYNPOQ8N3V7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SYNPOQ8N3V7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 MIR4651-201ENST00000582622 73 ntBASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNPOQ8N3V7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 AL034346.1-201ENST00000568244 1277 ntBASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNPOQ8N3V7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 TERF1P5-201ENST00000477545 1207 ntBASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.78■■□□□ 1.08
SYNPOQ8N3V7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 AC007322.4-201ENST00000509611 723 ntBASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.77■■□□□ 1.08
SYNPOQ8N3V7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SYNPOQ8N3V7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SYNPOQ8N3V7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
SYNPOQ8N3V7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 AP004607.7-201ENST00000527152 1677 ntBASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms