Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 AC010141.3-201ENST00000456659 717 ntBASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 pRNA.6-201ENST00000610482 90 ntBASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 pRNA.5-201ENST00000612139 90 ntBASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 pRNA.11-201ENST00000618423 90 ntBASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 pRNA.13-201ENST00000619112 90 ntBASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01561Q8N1V8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01561Q8N1V8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01561Q8N1V8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC01561Q8N1V8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01561Q8N1V8 AC073130.3-201ENST00000624389 2278 ntBASIC14.33□□□□□ -0.12
LINC01561Q8N1V8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01561Q8N1V8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01561Q8N1V8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01561Q8N1V8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01561Q8N1V8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINC01561Q8N1V8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01561Q8N1V8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 LINC01521-201ENST00000504184 1943 ntBASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 AC092171.4-201ENST00000609130 632 ntBASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01561Q8N1V8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 TSPY9P-201ENST00000440215 945 ntBASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 TSPY11P-201ENST00000442607 1045 ntBASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 AC239859.2-201ENST00000444165 318 ntBASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC01561Q8N1V8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms