Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
ABCA6Q8N139 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
ABCA6Q8N139 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
ABCA6Q8N139 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
ABCA6Q8N139 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
ABCA6Q8N139 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC32.18■■■□□ 2.74
ABCA6Q8N139 FGF8-207ENST00000618991 856 ntTSL 3 BASIC32.18■■■□□ 2.74
ABCA6Q8N139 AP006294.2-201ENST00000641667 209 ntBASIC32.18■■■□□ 2.74
ABCA6Q8N139 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
ABCA6Q8N139 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC32.18■■■□□ 2.74
ABCA6Q8N139 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
ABCA6Q8N139 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
ABCA6Q8N139 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC32.17■■■□□ 2.74
ABCA6Q8N139 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC32.17■■■□□ 2.74
ABCA6Q8N139 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC32.17■■■□□ 2.74
ABCA6Q8N139 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC32.17■■■□□ 2.74
ABCA6Q8N139 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
ABCA6Q8N139 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC32.16■■■□□ 2.74
ABCA6Q8N139 UNC93B5-201ENST00000530315 699 ntBASIC32.16■■■□□ 2.74
ABCA6Q8N139 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC32.16■■■□□ 2.74
ABCA6Q8N139 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ABCA6Q8N139 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ABCA6Q8N139 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
ABCA6Q8N139 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC32.15■■■□□ 2.74
ABCA6Q8N139 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
ABCA6Q8N139 BET1L-207ENST00000529614 560 ntTSL 5 BASIC32.15■■■□□ 2.74
ABCA6Q8N139 MMAB-206ENST00000540016 945 ntTSL 3 BASIC32.15■■■□□ 2.74
ABCA6Q8N139 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC32.15■■■□□ 2.74
ABCA6Q8N139 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC32.15■■■□□ 2.74
ABCA6Q8N139 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
ABCA6Q8N139 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
ABCA6Q8N139 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC32.15■■■□□ 2.74
ABCA6Q8N139 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
ABCA6Q8N139 AC079089.2-201ENST00000531211 1277 ntBASIC32.15■■■□□ 2.74
ABCA6Q8N139 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC32.15■■■□□ 2.74
ABCA6Q8N139 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC32.15■■■□□ 2.74
ABCA6Q8N139 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
ABCA6Q8N139 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
ABCA6Q8N139 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC32.14■■■□□ 2.74
ABCA6Q8N139 LINC01960-201ENST00000563759 1884 ntBASIC32.14■■■□□ 2.74
ABCA6Q8N139 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
ABCA6Q8N139 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC32.14■■■□□ 2.74
ABCA6Q8N139 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC32.14■■■□□ 2.74
ABCA6Q8N139 AP003097.1-201ENST00000530657 1135 ntBASIC32.14■■■□□ 2.74
ABCA6Q8N139 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC32.13■■■□□ 2.73
ABCA6Q8N139 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
ABCA6Q8N139 AC010980.2-201ENST00000587099 1412 ntBASIC32.13■■■□□ 2.73
ABCA6Q8N139 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC32.13■■■□□ 2.73
ABCA6Q8N139 RHOD-202ENST00000532559 538 ntTSL 3 BASIC32.13■■■□□ 2.73
ABCA6Q8N139 AC053503.5-201ENST00000601508 636 ntBASIC32.13■■■□□ 2.73
ABCA6Q8N139 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC32.13■■■□□ 2.73
ABCA6Q8N139 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
ABCA6Q8N139 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
ABCA6Q8N139 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
ABCA6Q8N139 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC32.13■■■□□ 2.73
ABCA6Q8N139 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
ABCA6Q8N139 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC32.12■■■□□ 2.73
ABCA6Q8N139 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
ABCA6Q8N139 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ABCA6Q8N139 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
ABCA6Q8N139 AC097658.1-201ENST00000475555 843 ntBASIC32.11■■■□□ 2.73
ABCA6Q8N139 RPS2P4-201ENST00000476944 856 ntBASIC32.11■■■□□ 2.73
ABCA6Q8N139 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
ABCA6Q8N139 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC32.11■■■□□ 2.73
ABCA6Q8N139 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
ABCA6Q8N139 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
ABCA6Q8N139 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
ABCA6Q8N139 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
ABCA6Q8N139 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC32.1■■■□□ 2.73
ABCA6Q8N139 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ABCA6Q8N139 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
ABCA6Q8N139 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
ABCA6Q8N139 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC32.1■■■□□ 2.73
ABCA6Q8N139 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC32.1■■■□□ 2.73
ABCA6Q8N139 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC32.1■■■□□ 2.73
ABCA6Q8N139 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC32.1■■■□□ 2.73
ABCA6Q8N139 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
ABCA6Q8N139 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ABCA6Q8N139 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 AC026366.1-201ENST00000488803 879 ntBASIC32.09■■■□□ 2.73
ABCA6Q8N139 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 AL034346.1-201ENST00000568244 1277 ntBASIC32.09■■■□□ 2.73
ABCA6Q8N139 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC32.09■■■□□ 2.73
ABCA6Q8N139 AC020928.2-201ENST00000588717 2197 ntBASIC32.09■■■□□ 2.73
ABCA6Q8N139 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC32.09■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms