Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SMC5Q8IY18 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.6■■□□□ 1.85
SMC5Q8IY18 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
SMC5Q8IY18 AC104564.3-201ENST00000582367 638 ntBASIC26.6■■□□□ 1.85
SMC5Q8IY18 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMC5Q8IY18 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMC5Q8IY18 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMC5Q8IY18 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SMC5Q8IY18 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.59■■□□□ 1.85
SMC5Q8IY18 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SMC5Q8IY18 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.59■■□□□ 1.85
SMC5Q8IY18 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
SMC5Q8IY18 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SMC5Q8IY18 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMC5Q8IY18 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMC5Q8IY18 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMC5Q8IY18 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.59■■□□□ 1.85
SMC5Q8IY18 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.59■■□□□ 1.85
SMC5Q8IY18 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMC5Q8IY18 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMC5Q8IY18 AC135279.3-201ENST00000610945 1311 ntBASIC26.59■■□□□ 1.85
SMC5Q8IY18 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.58■■□□□ 1.85
SMC5Q8IY18 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SMC5Q8IY18 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
SMC5Q8IY18 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SMC5Q8IY18 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.58■■□□□ 1.85
SMC5Q8IY18 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.58■■□□□ 1.85
SMC5Q8IY18 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.58■■□□□ 1.85
SMC5Q8IY18 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SMC5Q8IY18 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC26.57■■□□□ 1.84
SMC5Q8IY18 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
SMC5Q8IY18 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SMC5Q8IY18 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SMC5Q8IY18 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SMC5Q8IY18 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.56■■□□□ 1.84
SMC5Q8IY18 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMC5Q8IY18 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMC5Q8IY18 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMC5Q8IY18 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMC5Q8IY18 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.56■■□□□ 1.84
SMC5Q8IY18 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMC5Q8IY18 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.56■■□□□ 1.84
SMC5Q8IY18 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.56■■□□□ 1.84
SMC5Q8IY18 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.55■■□□□ 1.84
SMC5Q8IY18 AF106564.1-201ENST00000607058 2553 ntBASIC26.55■■□□□ 1.84
SMC5Q8IY18 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMC5Q8IY18 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMC5Q8IY18 AP006587.3-201ENST00000525742 1516 ntBASIC26.55■■□□□ 1.84
SMC5Q8IY18 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
SMC5Q8IY18 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC26.55■■□□□ 1.84
SMC5Q8IY18 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMC5Q8IY18 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMC5Q8IY18 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.55■■□□□ 1.84
SMC5Q8IY18 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.55■■□□□ 1.84
SMC5Q8IY18 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SMC5Q8IY18 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMC5Q8IY18 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
SMC5Q8IY18 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.55■■□□□ 1.84
SMC5Q8IY18 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.54■■□□□ 1.84
SMC5Q8IY18 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SMC5Q8IY18 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.54■■□□□ 1.84
SMC5Q8IY18 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SMC5Q8IY18 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SMC5Q8IY18 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.54■■□□□ 1.84
SMC5Q8IY18 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SMC5Q8IY18 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.54■■□□□ 1.84
SMC5Q8IY18 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.54■■□□□ 1.84
SMC5Q8IY18 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SMC5Q8IY18 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMC5Q8IY18 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMC5Q8IY18 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMC5Q8IY18 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.53■■□□□ 1.84
SMC5Q8IY18 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.53■■□□□ 1.84
SMC5Q8IY18 IGHV3-19-201ENST00000521488 291 ntBASIC26.53■■□□□ 1.84
SMC5Q8IY18 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.53■■□□□ 1.84
SMC5Q8IY18 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SMC5Q8IY18 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.53■■□□□ 1.84
SMC5Q8IY18 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMC5Q8IY18 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMC5Q8IY18 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SMC5Q8IY18 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMC5Q8IY18 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMC5Q8IY18 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMC5Q8IY18 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.52■■□□□ 1.84
SMC5Q8IY18 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SMC5Q8IY18 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.52■■□□□ 1.84
SMC5Q8IY18 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
SMC5Q8IY18 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMC5Q8IY18 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMC5Q8IY18 AL024507.2-201ENST00000606070 2574 ntBASIC26.52■■□□□ 1.84
SMC5Q8IY18 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
SMC5Q8IY18 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.51■■□□□ 1.83
SMC5Q8IY18 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.51■■□□□ 1.83
SMC5Q8IY18 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMC5Q8IY18 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMC5Q8IY18 AC096631.2-201ENST00000436136 790 ntBASIC26.51■■□□□ 1.83
SMC5Q8IY18 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.51■■□□□ 1.83
SMC5Q8IY18 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.51■■□□□ 1.83
SMC5Q8IY18 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SMC5Q8IY18 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms