Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.54■■□□□ 1.2
SCUBE3Q8IX30 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.54■■□□□ 1.2
SCUBE3Q8IX30 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 AC005224.4-201ENST00000583262 1652 ntBASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SCUBE3Q8IX30 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 YBX1P1-201ENST00000445822 960 ntBASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCUBE3Q8IX30 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
SCUBE3Q8IX30 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 AP006587.3-201ENST00000525742 1516 ntBASIC22.51■■□□□ 1.19
SCUBE3Q8IX30 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 LINC00565-201ENST00000562710 2331 ntBASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 AC123595.1-201ENST00000440769 1046 ntBASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 AC055733.4-201ENST00000638462 1354 ntBASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 LINC02228-203ENST00000641970 1355 ntBASIC22.5■■□□□ 1.19
SCUBE3Q8IX30 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCUBE3Q8IX30 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 AC097381.1-201ENST00000429019 1296 ntBASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 AC010542.4-201ENST00000563151 1910 ntBASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms