Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.91■■□□□ 1.42
CCDC60Q8IWA6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC60Q8IWA6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC60Q8IWA6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.91■■□□□ 1.42
CCDC60Q8IWA6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC60Q8IWA6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC60Q8IWA6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
CCDC60Q8IWA6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC60Q8IWA6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC60Q8IWA6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC60Q8IWA6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC60Q8IWA6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.88■■□□□ 1.41
CCDC60Q8IWA6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 AP001160.3-201ENST00000601484 763 ntBASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 RAP2CP1-201ENST00000605103 478 ntBASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 BID-214ENST00000617586 542 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 AC073111.5-205ENST00000641717 521 ntBASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC60Q8IWA6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.86■■□□□ 1.41
CCDC60Q8IWA6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC60Q8IWA6 CDCA4P2-201ENST00000441182 718 ntBASIC23.86■■□□□ 1.41
CCDC60Q8IWA6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.86■■□□□ 1.41
CCDC60Q8IWA6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.86■■□□□ 1.41
CCDC60Q8IWA6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 EEF1DP3-203ENST00000566025 782 ntBASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 UBE2DNL-204ENST00000602536 740 ntBASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC60Q8IWA6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 KRT18P11-201ENST00000435214 1283 ntBASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 AC138907.5-202ENST00000569484 235 ntBASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 AC092053.2-201ENST00000640557 1818 ntBASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC60Q8IWA6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms