Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.36■□□□□ 0.85
RAB43Q86YS6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RAB43Q86YS6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB43Q86YS6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB43Q86YS6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB43Q86YS6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.36■□□□□ 0.85
RAB43Q86YS6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.36■□□□□ 0.85
RAB43Q86YS6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB43Q86YS6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB43Q86YS6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RAB43Q86YS6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB43Q86YS6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.35■□□□□ 0.85
RAB43Q86YS6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.35■□□□□ 0.85
RAB43Q86YS6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB43Q86YS6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RAB43Q86YS6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB43Q86YS6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.35■□□□□ 0.85
RAB43Q86YS6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.35■□□□□ 0.85
RAB43Q86YS6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB43Q86YS6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB43Q86YS6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.35■□□□□ 0.85
RAB43Q86YS6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
RAB43Q86YS6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB43Q86YS6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB43Q86YS6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 KRT19P1-201ENST00000405746 1186 ntBASIC20.34■□□□□ 0.85
RAB43Q86YS6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB43Q86YS6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB43Q86YS6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB43Q86YS6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB43Q86YS6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB43Q86YS6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB43Q86YS6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB43Q86YS6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
RAB43Q86YS6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB43Q86YS6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RAB43Q86YS6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAB43Q86YS6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.33■□□□□ 0.85
RAB43Q86YS6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RAB43Q86YS6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RAB43Q86YS6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.33■□□□□ 0.85
RAB43Q86YS6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RAB43Q86YS6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB43Q86YS6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.33■□□□□ 0.84
RAB43Q86YS6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB43Q86YS6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB43Q86YS6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB43Q86YS6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 AC006015.1-201ENST00000429970 570 ntBASIC20.32■□□□□ 0.84
RAB43Q86YS6 AC079140.4-201ENST00000507448 529 ntBASIC20.32■□□□□ 0.84
RAB43Q86YS6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.32■□□□□ 0.84
RAB43Q86YS6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB43Q86YS6 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.32■□□□□ 0.84
RAB43Q86YS6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB43Q86YS6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB43Q86YS6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RAB43Q86YS6 AP004607.4-201ENST00000530158 1459 ntBASIC20.31■□□□□ 0.84
RAB43Q86YS6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 AC004854.2-201ENST00000608450 1441 ntBASIC20.31■□□□□ 0.84
RAB43Q86YS6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.31■□□□□ 0.84
RAB43Q86YS6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RAB43Q86YS6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB43Q86YS6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
RAB43Q86YS6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB43Q86YS6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RAB43Q86YS6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB43Q86YS6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
RAB43Q86YS6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB43Q86YS6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB43Q86YS6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB43Q86YS6 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.3■□□□□ 0.84
RAB43Q86YS6 KRT18P61-201ENST00000585825 1298 ntBASIC20.3■□□□□ 0.84
RAB43Q86YS6 AC080038.1-201ENST00000611274 1154 ntBASIC20.3■□□□□ 0.84
RAB43Q86YS6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB43Q86YS6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB43Q86YS6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms