Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL23A1Q86Y22 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.22■■□□□ 1.95
COL23A1Q86Y22 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.22■■□□□ 1.95
COL23A1Q86Y22 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL23A1Q86Y22 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL23A1Q86Y22 ECEL1P3-201ENST00000427961 737 ntBASIC27.22■■□□□ 1.95
COL23A1Q86Y22 ISCU-212ENST00000547005 795 ntTSL 3 BASIC27.22■■□□□ 1.95
COL23A1Q86Y22 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
COL23A1Q86Y22 AC010980.2-201ENST00000587099 1412 ntBASIC27.22■■□□□ 1.95
COL23A1Q86Y22 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.22■■□□□ 1.95
COL23A1Q86Y22 AP004607.7-201ENST00000527152 1677 ntBASIC27.21■■□□□ 1.95
COL23A1Q86Y22 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.21■■□□□ 1.95
COL23A1Q86Y22 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL23A1Q86Y22 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.21■■□□□ 1.95
COL23A1Q86Y22 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.21■■□□□ 1.95
COL23A1Q86Y22 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
COL23A1Q86Y22 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL23A1Q86Y22 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL23A1Q86Y22 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.21■■□□□ 1.95
COL23A1Q86Y22 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL23A1Q86Y22 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
COL23A1Q86Y22 MIR1224-201ENST00000408193 85 ntBASIC27.2■■□□□ 1.94
COL23A1Q86Y22 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
COL23A1Q86Y22 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
COL23A1Q86Y22 AP003097.1-201ENST00000530657 1135 ntBASIC27.2■■□□□ 1.94
COL23A1Q86Y22 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.2■■□□□ 1.94
COL23A1Q86Y22 AC053503.5-201ENST00000601508 636 ntBASIC27.2■■□□□ 1.94
COL23A1Q86Y22 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC27.2■■□□□ 1.94
COL23A1Q86Y22 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL23A1Q86Y22 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
COL23A1Q86Y22 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC27.19■■□□□ 1.94
COL23A1Q86Y22 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL23A1Q86Y22 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
COL23A1Q86Y22 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL23A1Q86Y22 UBE2SP1-201ENST00000450587 669 ntBASIC27.19■■□□□ 1.94
COL23A1Q86Y22 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC27.19■■□□□ 1.94
COL23A1Q86Y22 AL359736.2-201ENST00000621992 437 ntBASIC27.19■■□□□ 1.94
COL23A1Q86Y22 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL23A1Q86Y22 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL23A1Q86Y22 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL23A1Q86Y22 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 AC142381.3-201ENST00000568208 1670 ntBASIC27.18■■□□□ 1.94
COL23A1Q86Y22 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 AC079089.2-201ENST00000531211 1277 ntBASIC27.18■■□□□ 1.94
COL23A1Q86Y22 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC27.18■■□□□ 1.94
COL23A1Q86Y22 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC27.18■■□□□ 1.94
COL23A1Q86Y22 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL23A1Q86Y22 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL23A1Q86Y22 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL23A1Q86Y22 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL23A1Q86Y22 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.17■■□□□ 1.94
COL23A1Q86Y22 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL23A1Q86Y22 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC27.17■■□□□ 1.94
COL23A1Q86Y22 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC27.17■■□□□ 1.94
COL23A1Q86Y22 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL23A1Q86Y22 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL23A1Q86Y22 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL23A1Q86Y22 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL23A1Q86Y22 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL23A1Q86Y22 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL23A1Q86Y22 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL23A1Q86Y22 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL23A1Q86Y22 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC27.14■■□□□ 1.94
COL23A1Q86Y22 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL23A1Q86Y22 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
COL23A1Q86Y22 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms