Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRTM1Q86UE6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 AL121603.2-201ENST00000557373 2117 ntBASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRTM1Q86UE6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 AL451085.2-201ENST00000605085 799 ntBASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRRTM1Q86UE6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 OXCT2P1-201ENST00000447263 1535 ntBASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 AC133637.1-201ENST00000624115 1537 ntBASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM1Q86UE6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 KRT125P-201ENST00000546827 989 ntBASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 AC010997.5-201ENST00000609182 354 ntBASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM1Q86UE6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LRRTM1Q86UE6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms