Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 KRT18P11-201ENST00000435214 1283 ntBASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
UBE3BQ7Z3V4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 UBE2DNL-204ENST00000602536 740 ntBASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.8■■□□□ 1.88
UBE3BQ7Z3V4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 MFSD11-216ENST00000590393 1141 ntBASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.79■■□□□ 1.88
UBE3BQ7Z3V4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
UBE3BQ7Z3V4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 AC127496.7-201ENST00000625110 1798 ntBASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBE3BQ7Z3V4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBE3BQ7Z3V4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.76■■□□□ 1.87
UBE3BQ7Z3V4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
UBE3BQ7Z3V4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBE3BQ7Z3V4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.76■■□□□ 1.87
UBE3BQ7Z3V4 AC010141.2-201ENST00000452426 721 ntBASIC26.76■■□□□ 1.87
UBE3BQ7Z3V4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBE3BQ7Z3V4 AC138907.5-202ENST00000569484 235 ntBASIC26.76■■□□□ 1.87
UBE3BQ7Z3V4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 AC026185.1-201ENST00000445748 174 ntBASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 EEF1DP3-203ENST00000566025 782 ntBASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
UBE3BQ7Z3V4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
UBE3BQ7Z3V4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.74■■□□□ 1.87
UBE3BQ7Z3V4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBE3BQ7Z3V4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBE3BQ7Z3V4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.74■■□□□ 1.87
UBE3BQ7Z3V4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
UBE3BQ7Z3V4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.74■■□□□ 1.87
UBE3BQ7Z3V4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 ID1-201ENST00000376105 1233 ntBASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
UBE3BQ7Z3V4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms