Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.71■□□□□ 0.91
LETMD1Q6P1Q0 MIR4767-201ENST00000582827 78 ntBASIC20.71■□□□□ 0.91
LETMD1Q6P1Q0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LETMD1Q6P1Q0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LETMD1Q6P1Q0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 AC104564.3-201ENST00000582367 638 ntBASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 FEM1AP4-201ENST00000443167 1987 ntBASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 AP004607.7-201ENST00000527152 1677 ntBASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LETMD1Q6P1Q0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 UNC93B3-201ENST00000308076 687 ntBASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LETMD1Q6P1Q0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 AC131212.1-201ENST00000613771 668 ntBASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.68■□□□□ 0.9
LETMD1Q6P1Q0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 AL034346.1-201ENST00000568244 1277 ntBASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LETMD1Q6P1Q0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 BX842568.3-201ENST00000418104 571 ntBASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 AC024257.2-201ENST00000549699 147 ntBASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 AC003102.1-202ENST00000563394 1796 ntBASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.66■□□□□ 0.9
LETMD1Q6P1Q0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LETMD1Q6P1Q0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LETMD1Q6P1Q0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LETMD1Q6P1Q0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LETMD1Q6P1Q0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LETMD1Q6P1Q0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.64■□□□□ 0.89
LETMD1Q6P1Q0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LETMD1Q6P1Q0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LETMD1Q6P1Q0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.64■□□□□ 0.89
LETMD1Q6P1Q0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.64■□□□□ 0.89
LETMD1Q6P1Q0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LETMD1Q6P1Q0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms