Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GFI1BQ5VTD9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GFI1BQ5VTD9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
GFI1BQ5VTD9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
GFI1BQ5VTD9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GFI1BQ5VTD9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 LETM1P2-201ENST00000597330 2178 ntBASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GFI1BQ5VTD9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 SNX5-217ENST00000606557 1087 ntBASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 AC137630.3-201ENST00000607245 391 ntBASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 AFG3L1P-217ENST00000557444 2447 ntBASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GFI1BQ5VTD9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms