Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS13DQ5THJ4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 RBM17P2-201ENST00000616397 1405 ntBASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VPS13DQ5THJ4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 AP006587.3-201ENST00000525742 1516 ntBASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS13DQ5THJ4 AP004607.7-201ENST00000527152 1677 ntBASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 OR7E47P-201ENST00000546390 1422 ntBASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VPS13DQ5THJ4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 AL512625.2-201ENST00000417533 625 ntBASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 AC008550.1-201ENST00000511500 884 ntBASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 AC008694.1-202ENST00000636953 945 ntBASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13DQ5THJ4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS13DQ5THJ4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms