Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01556Q5JQF7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 RARRES2P6-201ENST00000567333 442 ntBASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 TERF1P2-201ENST00000583350 1212 ntBASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 AC055733.4-201ENST00000638462 1354 ntBASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01556Q5JQF7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 FAM99A-202ENST00000538190 1989 ntBASIC14.53□□□□□ -0.08
LINC01556Q5JQF7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01556Q5JQF7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 CCDC92B-201ENST00000575506 885 ntBASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 C11orf96-202ENST00000528572 1834 ntBASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01556Q5JQF7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms