Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 KRT18P11-201ENST00000435214 1283 ntBASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 AC092053.2-201ENST00000640557 1818 ntBASIC23.24■■□□□ 1.31
DCAF4L1Q3SXM0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 RARRES2P11-201ENST00000635158 484 ntBASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
DCAF4L1Q3SXM0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 EEF1DP3-203ENST00000566025 782 ntBASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.22■■□□□ 1.31
DCAF4L1Q3SXM0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 AC138907.5-202ENST00000569484 235 ntBASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 AP001160.3-201ENST00000601484 763 ntBASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DCAF4L1Q3SXM0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 AC010141.2-201ENST00000452426 721 ntBASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DCAF4L1Q3SXM0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 AC053503.5-201ENST00000601508 636 ntBASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 BID-214ENST00000617586 542 ntTSL 5 BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DCAF4L1Q3SXM0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 AC090192.1-201ENST00000517740 490 ntBASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DCAF4L1Q3SXM0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms