Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 AC008764.7-201ENST00000593779 1081 ntBASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF3Q3KNV8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF3Q3KNV8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF3Q3KNV8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 AC087742.1-201ENST00000575880 1738 ntBASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCGF3Q3KNV8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 AC099791.1-201ENST00000416440 715 ntBASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 OR2I1P-207ENST00000453522 948 ntBASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 CA15P2-201ENST00000611168 834 ntBASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF3Q3KNV8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCGF3Q3KNV8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 AC010542.4-201ENST00000563151 1910 ntBASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms