Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D28Q2M2D7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 YBX1P1-201ENST00000445822 960 ntBASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
TBC1D28Q2M2D7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TBC1D28Q2M2D7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D28Q2M2D7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.58■□□□□ 0.57
TBC1D28Q2M2D7 LINC02228-203ENST00000641970 1355 ntBASIC18.58■□□□□ 0.57
TBC1D28Q2M2D7 AC005224.4-201ENST00000583262 1652 ntBASIC18.58■□□□□ 0.57
TBC1D28Q2M2D7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 AC123595.1-201ENST00000440769 1046 ntBASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D28Q2M2D7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 TPRG1LP1-201ENST00000598702 760 ntBASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 C11orf96-202ENST00000528572 1834 ntBASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 AP006587.3-201ENST00000525742 1516 ntBASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 FAM99A-202ENST00000538190 1989 ntBASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TBC1D28Q2M2D7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TBC1D28Q2M2D7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.55■□□□□ 0.56
TBC1D28Q2M2D7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 EP400NL-214ENST00000641289 2402 ntBASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D28Q2M2D7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms