Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.96■□□□□ 0.95
RSPO4Q2I0M5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RSPO4Q2I0M5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RSPO4Q2I0M5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.94■□□□□ 0.94
RSPO4Q2I0M5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RSPO4Q2I0M5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RSPO4Q2I0M5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.94■□□□□ 0.94
RSPO4Q2I0M5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
RSPO4Q2I0M5 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.94■□□□□ 0.94
RSPO4Q2I0M5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.94■□□□□ 0.94
RSPO4Q2I0M5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RSPO4Q2I0M5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RSPO4Q2I0M5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 CYP2T3P-201ENST00000601990 817 ntBASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RSPO4Q2I0M5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 AC133561.5-201ENST00000635547 218 ntBASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RSPO4Q2I0M5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RSPO4Q2I0M5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RSPO4Q2I0M5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RSPO4Q2I0M5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RSPO4Q2I0M5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RSPO4Q2I0M5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.91■□□□□ 0.94
RSPO4Q2I0M5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.91■□□□□ 0.94
RSPO4Q2I0M5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.91■□□□□ 0.94
RSPO4Q2I0M5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.91■□□□□ 0.94
RSPO4Q2I0M5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 AC008403.3-201ENST00000598924 454 ntBASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RSPO4Q2I0M5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.89■□□□□ 0.94
RSPO4Q2I0M5 AC010980.2-201ENST00000587099 1412 ntBASIC20.89■□□□□ 0.94
RSPO4Q2I0M5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.89■□□□□ 0.93
RSPO4Q2I0M5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RSPO4Q2I0M5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.89■□□□□ 0.93
RSPO4Q2I0M5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.89■□□□□ 0.93
RSPO4Q2I0M5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RSPO4Q2I0M5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.89■□□□□ 0.93
RSPO4Q2I0M5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.89■□□□□ 0.93
RSPO4Q2I0M5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RSPO4Q2I0M5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO4Q2I0M5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms