Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PDS5AQ29RF7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
PDS5AQ29RF7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.85■■□□□ 1.73
PDS5AQ29RF7 SLC7A5P1-201ENST00000568957 537 ntBASIC25.85■■□□□ 1.73
PDS5AQ29RF7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.85■■□□□ 1.73
PDS5AQ29RF7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PDS5AQ29RF7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.84■■□□□ 1.73
PDS5AQ29RF7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDS5AQ29RF7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDS5AQ29RF7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDS5AQ29RF7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PDS5AQ29RF7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDS5AQ29RF7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDS5AQ29RF7 CROCCP5-201ENST00000436658 830 ntBASIC25.84■■□□□ 1.73
PDS5AQ29RF7 DUX4L16-201ENST00000555130 1264 ntBASIC25.84■■□□□ 1.73
PDS5AQ29RF7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.84■■□□□ 1.73
PDS5AQ29RF7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PDS5AQ29RF7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
PDS5AQ29RF7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PDS5AQ29RF7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.83■■□□□ 1.73
PDS5AQ29RF7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
PDS5AQ29RF7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.83■■□□□ 1.73
PDS5AQ29RF7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
PDS5AQ29RF7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PDS5AQ29RF7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.82■■□□□ 1.72
PDS5AQ29RF7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PDS5AQ29RF7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.81■■□□□ 1.72
PDS5AQ29RF7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDS5AQ29RF7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.81■■□□□ 1.72
PDS5AQ29RF7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.81■■□□□ 1.72
PDS5AQ29RF7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.81■■□□□ 1.72
PDS5AQ29RF7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.81■■□□□ 1.72
PDS5AQ29RF7 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.81■■□□□ 1.72
PDS5AQ29RF7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.81■■□□□ 1.72
PDS5AQ29RF7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDS5AQ29RF7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 AC231657.2-201ENST00000624556 255 ntBASIC25.8■■□□□ 1.72
PDS5AQ29RF7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.8■■□□□ 1.72
PDS5AQ29RF7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 AC092053.2-201ENST00000640557 1818 ntBASIC25.79■■□□□ 1.72
PDS5AQ29RF7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.79■■□□□ 1.72
PDS5AQ29RF7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 C1orf229-201ENST00000623686 2258 ntBASIC25.78■■□□□ 1.72
PDS5AQ29RF7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.78■■□□□ 1.72
PDS5AQ29RF7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms