Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 CDC11YJR076C 1248 nt2.2□□□□□ -2.06
VPS13Q07878 COS111YBR203W 2775 nt2.2□□□□□ -2.06
VPS13Q07878 FRE1YLR214W 2061 nt2.2□□□□□ -2.06
VPS13Q07878 SMC6YLR383W 3345 nt2.2□□□□□ -2.06
VPS13Q07878 SEG1YMR086W 2883 nt2.19□□□□□ -2.06
VPS13Q07878 SLX9YGR081C 633 nt2.19□□□□□ -2.06
VPS13Q07878 RPC17YJL011C 486 nt2.19□□□□□ -2.06
VPS13Q07878 RPN13YLR421C 471 nt2.19□□□□□ -2.06
VPS13Q07878 MF(ALPHA)1YPL187W 498 nt2.19□□□□□ -2.06
VPS13Q07878 TTI1YKL033W 3117 nt2.19□□□□□ -2.06
VPS13Q07878 YBT1YLL048C 4986 nt2.19□□□□□ -2.06
VPS13Q07878 BNI1YNL271C 5862 nt2.19□□□□□ -2.06
VPS13Q07878 GIP3YPL137C 3831 nt2.19□□□□□ -2.06
VPS13Q07878 ENT1YDL161W 1365 nt2.18□□□□□ -2.06
VPS13Q07878 DIS3YOL021C 3006 nt2.18□□□□□ -2.06
VPS13Q07878 YLR363W-AYLR363W-A 258 nt2.18□□□□□ -2.06
VPS13Q07878 SPS18YNL204C 903 nt2.18□□□□□ -2.06
VPS13Q07878 MSS18YPR134W 807 nt2.18□□□□□ -2.06
VPS13Q07878 MIH1YMR036C 1665 nt2.18□□□□□ -2.06
VPS13Q07878 SGM1YJR134C 2124 nt2.18□□□□□ -2.06
VPS13Q07878 NOP14YDL148C 2433 nt2.18□□□□□ -2.06
VPS13Q07878 VPS27YNR006W 1869 nt2.18□□□□□ -2.06
VPS13Q07878 YDR464C-AYDR464C-A 189 nt2.17□□□□□ -2.06
VPS13Q07878 ISF1YMR081C 1017 nt2.17□□□□□ -2.06
VPS13Q07878 UTP22YGR090W 3714 nt2.17□□□□□ -2.06
VPS13Q07878 CTF4YPR135W 2784 nt2.17□□□□□ -2.06
VPS13Q07878 VPS8YAL002W 3825 nt2.17□□□□□ -2.06
VPS13Q07878 RTT107YHR154W 3213 nt2.17□□□□□ -2.06
VPS13Q07878 FLO10YKR102W 3510 nt2.17□□□□□ -2.06
VPS13Q07878 INP52YNL106C 3552 nt2.17□□□□□ -2.06
VPS13Q07878 RPS30BYOR182C 192 nt2.17□□□□□ -2.06
VPS13Q07878 ATP3YBR039W 936 nt2.17□□□□□ -2.06
VPS13Q07878 MAL32YBR299W 1755 nt2.17□□□□□ -2.06
VPS13Q07878 FKS3YMR306W 5358 nt2.16□□□□□ -2.06
VPS13Q07878 MSE1YOL033W 1611 nt2.16□□□□□ -2.06
VPS13Q07878 HER1YOR227W 3741 nt2.16□□□□□ -2.06
VPS13Q07878 SEC26YDR238C 2922 nt2.16□□□□□ -2.06
VPS13Q07878 YDR274CYDR274C 372 nt2.16□□□□□ -2.06
VPS13Q07878 GYP7YDL234C 2241 nt2.16□□□□□ -2.06
VPS13Q07878 RRP36YOR287C 903 nt2.15□□□□□ -2.06
VPS13Q07878 SSN2YDR443C 4263 nt2.15□□□□□ -2.06
VPS13Q07878 SEG2YKL105C 3399 nt2.15□□□□□ -2.06
VPS13Q07878 HRD1YOL013C 1656 nt2.15□□□□□ -2.06
VPS13Q07878 YIL046W-AYIL046W-A 165 nt2.15□□□□□ -2.07
VPS13Q07878 EXO84YBR102C 2262 nt2.15□□□□□ -2.07
VPS13Q07878 YGL082WYGL082W 1146 nt2.15□□□□□ -2.07
VPS13Q07878 YCG1YDR325W 3108 nt2.15□□□□□ -2.07
VPS13Q07878 YBR197CYBR197C 654 nt2.14□□□□□ -2.07
VPS13Q07878 CUZ1YNL155W 825 nt2.14□□□□□ -2.07
VPS13Q07878 SHE4YOR035C 2370 nt2.14□□□□□ -2.07
VPS13Q07878 ATG23YLR431C 1362 nt2.14□□□□□ -2.07
VPS13Q07878 YRB1YDR002W 606 nt2.13□□□□□ -2.07
VPS13Q07878 YDR149CYDR149C 708 nt2.13□□□□□ -2.07
VPS13Q07878 DCG1YIR030C 735 nt2.13□□□□□ -2.07
VPS13Q07878 CSI1YMR025W 888 nt2.13□□□□□ -2.07
VPS13Q07878 SPS4YOR313C 1017 nt2.13□□□□□ -2.07
VPS13Q07878 MOB2YFL034C-B 864 nt2.13□□□□□ -2.07
VPS13Q07878 RHO3YIL118W 696 nt2.13□□□□□ -2.07
VPS13Q07878 YNL013CYNL013C 378 nt2.13□□□□□ -2.07
VPS13Q07878 GYP5YPL249C 2685 nt2.12□□□□□ -2.07
VPS13Q07878 RIM1YCR028C-A 408 nt2.12□□□□□ -2.07
VPS13Q07878 ECO1YFR027W 846 nt2.12□□□□□ -2.07
VPS13Q07878 RPS23AYGR118W 438 nt2.12□□□□□ -2.07
VPS13Q07878 CIR1YGR207C 786 nt2.12□□□□□ -2.07
VPS13Q07878 YAL059C-AYAL059C-A 423 nt2.12□□□□□ -2.07
VPS13Q07878 MEI5YPL121C 669 nt2.12□□□□□ -2.07
VPS13Q07878 RPS23BYPR132W 438 nt2.12□□□□□ -2.07
VPS13Q07878 INA22YIR024C 651 nt2.12□□□□□ -2.07
VPS13Q07878 YBR287WYBR287W 1284 nt2.12□□□□□ -2.07
VPS13Q07878 FRE4YNR060W 2160 nt2.12□□□□□ -2.07
VPS13Q07878 CCH1YGR217W 6120 nt2.11□□□□□ -2.07
VPS13Q07878 SAS5YOR213C 747 nt2.11□□□□□ -2.07
VPS13Q07878 GCN4YEL009C 846 nt2.11□□□□□ -2.07
VPS13Q07878 ATG19YOL082W 1248 nt2.11□□□□□ -2.07
VPS13Q07878 SWD2YKL018W 990 nt2.1□□□□□ -2.07
VPS13Q07878 YLR224WYLR224W 1110 nt2.1□□□□□ -2.07
VPS13Q07878 XRS2YDR369C 2565 nt2.1□□□□□ -2.07
VPS13Q07878 MSH2YOL090W 2895 nt2.1□□□□□ -2.07
VPS13Q07878 SIP3YNL257C 3690 nt2.1□□□□□ -2.07
VPS13Q07878 SET2YJL168C 2202 nt2.1□□□□□ -2.07
VPS13Q07878 ADH4YGL256W 1149 nt2.1□□□□□ -2.07
VPS13Q07878 SNU114YKL173W 3027 nt2.1□□□□□ -2.07
VPS13Q07878 PET191YJR034W 327 nt2.09□□□□□ -2.07
VPS13Q07878 RDH54YBR073W 2877 nt2.09□□□□□ -2.07
VPS13Q07878 BRR2YER172C 6492 nt2.09□□□□□ -2.07
VPS13Q07878 GCV2YMR189W 3105 nt2.09□□□□□ -2.07
VPS13Q07878 CTH1YDR151C 978 nt2.09□□□□□ -2.08
VPS13Q07878 SEC9YGR009C 1956 nt2.09□□□□□ -2.08
VPS13Q07878 YIL024CYIL024C 570 nt2.08□□□□□ -2.08
VPS13Q07878 YBL005W-AYBL005W-A 1323 nt2.08□□□□□ -2.08
VPS13Q07878 YMR046CYMR046C 1323 nt2.08□□□□□ -2.08
VPS13Q07878 UNG1YML021C 1080 nt2.08□□□□□ -2.08
VPS13Q07878 YMR272W-BYMR272W-B 108 nt2.08□□□□□ -2.08
VPS13Q07878 SAS4YDR181C 1446 nt2.08□□□□□ -2.08
VPS13Q07878 YMR310CYMR310C 954 nt2.08□□□□□ -2.08
VPS13Q07878 YJL015CYJL015C 285 nt2.07□□□□□ -2.08
VPS13Q07878 EMG1YLR186W 759 nt2.07□□□□□ -2.08
VPS13Q07878 SPO71YDR104C 3738 nt2.07□□□□□ -2.08
VPS13Q07878 KRE2YDR483W 1329 nt2.07□□□□□ -2.08
VPS13Q07878 RPL36AYMR194W 303 nt2.07□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 41.9 ms