Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CFHR3Q02985 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CFHR3Q02985 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.75■□□□□ 0.27
CFHR3Q02985 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 AC012676.1-201ENST00000574705 1949 ntBASIC16.75■□□□□ 0.27
CFHR3Q02985 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CFHR3Q02985 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.75■□□□□ 0.27
CFHR3Q02985 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CFHR3Q02985 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 GUSBP5-202ENST00000510805 1989 ntBASIC16.75■□□□□ 0.27
CFHR3Q02985 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFHR3Q02985 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CFHR3Q02985 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CFHR3Q02985 AP004607.4-201ENST00000530158 1459 ntBASIC16.74■□□□□ 0.27
CFHR3Q02985 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.74■□□□□ 0.27
CFHR3Q02985 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.74■□□□□ 0.27
CFHR3Q02985 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.74■□□□□ 0.27
CFHR3Q02985 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CFHR3Q02985 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CFHR3Q02985 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.74■□□□□ 0.27
CFHR3Q02985 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.74■□□□□ 0.27
CFHR3Q02985 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.74■□□□□ 0.27
CFHR3Q02985 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFHR3Q02985 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFHR3Q02985 AC104564.3-201ENST00000582367 638 ntBASIC16.74■□□□□ 0.27
CFHR3Q02985 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.74■□□□□ 0.27
CFHR3Q02985 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.74■□□□□ 0.27
CFHR3Q02985 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFHR3Q02985 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.74■□□□□ 0.27
CFHR3Q02985 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFHR3Q02985 KRT87P-202ENST00000534226 1464 ntBASIC16.73■□□□□ 0.27
CFHR3Q02985 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFHR3Q02985 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFHR3Q02985 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.73■□□□□ 0.27
CFHR3Q02985 AC004854.2-201ENST00000608450 1441 ntBASIC16.73■□□□□ 0.27
CFHR3Q02985 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFHR3Q02985 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFHR3Q02985 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CFHR3Q02985 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFHR3Q02985 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.73■□□□□ 0.27
CFHR3Q02985 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.73■□□□□ 0.27
CFHR3Q02985 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CFHR3Q02985 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.73■□□□□ 0.27
CFHR3Q02985 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.73■□□□□ 0.27
CFHR3Q02985 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.73■□□□□ 0.27
CFHR3Q02985 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFHR3Q02985 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFHR3Q02985 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFHR3Q02985 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.73■□□□□ 0.27
CFHR3Q02985 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFHR3Q02985 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CFHR3Q02985 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFHR3Q02985 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CFHR3Q02985 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.72■□□□□ 0.27
CFHR3Q02985 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.72■□□□□ 0.27
CFHR3Q02985 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.72■□□□□ 0.27
CFHR3Q02985 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.72■□□□□ 0.27
CFHR3Q02985 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.72■□□□□ 0.27
CFHR3Q02985 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.72■□□□□ 0.27
CFHR3Q02985 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CFHR3Q02985 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.72■□□□□ 0.27
CFHR3Q02985 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.72■□□□□ 0.27
CFHR3Q02985 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFHR3Q02985 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CFHR3Q02985 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFHR3Q02985 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFHR3Q02985 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFHR3Q02985 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.71■□□□□ 0.27
CFHR3Q02985 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFHR3Q02985 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFHR3Q02985 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFHR3Q02985 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.71■□□□□ 0.27
CFHR3Q02985 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFHR3Q02985 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CFHR3Q02985 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.71■□□□□ 0.27
CFHR3Q02985 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.71■□□□□ 0.27
CFHR3Q02985 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.71■□□□□ 0.27
CFHR3Q02985 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFHR3Q02985 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFHR3Q02985 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
CFHR3Q02985 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CFHR3Q02985 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFHR3Q02985 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.7■□□□□ 0.26
CFHR3Q02985 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 ECEL1P1-201ENST00000373592 1742 ntBASIC16.7■□□□□ 0.26
CFHR3Q02985 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFHR3Q02985 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms