Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YJR011CYJR011C 786 nt5.04□□□□□ -1.6
UBP3Q01477 STP22YCL008C 1158 nt5.04□□□□□ -1.6
UBP3Q01477 YCL012CYCL012C 405 nt5.04□□□□□ -1.6
UBP3Q01477 PRP3YDR473C 1410 nt5.04□□□□□ -1.6 RIP-Chip
UBP3Q01477 GDS1YOR355W 1569 nt5.04□□□□□ -1.6
UBP3Q01477 PRP11YDL043C 801 nt5.03□□□□□ -1.6
UBP3Q01477 YDL050CYDL050C 372 nt5.03□□□□□ -1.6
UBP3Q01477 PEA2YER149C 1263 nt5.03□□□□□ -1.6 RIP-Chip
UBP3Q01477 FMP33YJL161W 543 nt5.03□□□□□ -1.6
UBP3Q01477 YAR030CYAR030C 342 nt5.03□□□□□ -1.6
UBP3Q01477 MRPL39YML009C 213 nt5.03□□□□□ -1.6
UBP3Q01477 FOL3YMR113W 1284 nt5.03□□□□□ -1.6
UBP3Q01477 TRM112YNR046W 408 nt5.03□□□□□ -1.6 RIP-Chip
UBP3Q01477 YOR186WYOR186W 435 nt5.03□□□□□ -1.6
UBP3Q01477 NUP116YMR047C 3342 nt5.03□□□□□ -1.6
UBP3Q01477 CDC37YDR168W 1521 nt5.02□□□□□ -1.61
UBP3Q01477 YFL002W-BYFL002W-B 1317 nt5.02□□□□□ -1.61
UBP3Q01477 YGR161W-AYGR161W-A 1317 nt5.02□□□□□ -1.61
UBP3Q01477 TUB3YML124C 1338 nt5.02□□□□□ -1.61
UBP3Q01477 YBL100W-AYBL100W-A 1317 nt5.02□□□□□ -1.61
UBP3Q01477 RDS2YPL133C 1341 nt5.02□□□□□ -1.61
UBP3Q01477 YCL020WYCL020W 1317 nt5.02□□□□□ -1.61
UBP3Q01477 SKG3YLR187W 3081 nt5.02□□□□□ -1.61
UBP3Q01477 PDR5YOR153W 4536 nt5.02□□□□□ -1.61
UBP3Q01477 RIM1YCR028C-A 408 nt5.02□□□□□ -1.61
UBP3Q01477 TSC13YDL015C 933 nt5.02□□□□□ -1.61
UBP3Q01477 BSC1YDL037C 987 nt5.02□□□□□ -1.61
UBP3Q01477 YDR271CYDR271C 372 nt5.02□□□□□ -1.61
UBP3Q01477 BCP1YDR361C 852 nt5.02□□□□□ -1.61
UBP3Q01477 YER145C-AYER145C-A 438 nt5.02□□□□□ -1.61
UBP3Q01477 IRC19YLL033W 693 nt5.02□□□□□ -1.61
UBP3Q01477 MIM2YLR099W-A 264 nt5.02□□□□□ -1.61 RIP-Chip
UBP3Q01477 GIM5YML094W 492 nt5.02□□□□□ -1.61
UBP3Q01477 IGO1YNL157W 507 nt5.02□□□□□ -1.61
UBP3Q01477 YNR071CYNR071C 1029 nt5.02□□□□□ -1.61
UBP3Q01477 YBR103C-AYBR103C-A 144 nt5.02□□□□□ -1.61
UBP3Q01477 SEC59YMR013C 1560 nt5.02□□□□□ -1.61 RIP-Chip
UBP3Q01477 RSC58YLR033W 1509 nt5.02□□□□□ -1.61
UBP3Q01477 HOT1YMR172W 2160 nt5.01□□□□□ -1.61 RIP-Chip
UBP3Q01477 CUE3YGL110C 1875 nt5.01□□□□□ -1.61 RIP-Chip
UBP3Q01477 RTC5YOR118W 1704 nt5.01□□□□□ -1.61
UBP3Q01477 UBC13YDR092W 462 nt5.01□□□□□ -1.61
UBP3Q01477 YDR535CYDR535C 501 nt5.01□□□□□ -1.61
UBP3Q01477 YGR018CYGR018C 330 nt5.01□□□□□ -1.61
UBP3Q01477 YHI9YHR029C 885 nt5.01□□□□□ -1.61
UBP3Q01477 OAR1YKL055C 837 nt5.01□□□□□ -1.61
UBP3Q01477 COQ9YLR201C 783 nt5.01□□□□□ -1.61 RIP-Chip
UBP3Q01477 NMA1YLR328W 1206 nt5.01□□□□□ -1.61 RIP-Chip
UBP3Q01477 YMR310CYMR310C 954 nt5.01□□□□□ -1.61
UBP3Q01477 MRP21YBL090W 534 nt5.01□□□□□ -1.61
UBP3Q01477 MSS4YDR208W 2340 nt5.01□□□□□ -1.61 RIP-Chip
UBP3Q01477 EMP46YLR080W 1335 nt5□□□□□ -1.61 RIP-Chip
UBP3Q01477 GDE1YPL110C 3672 nt5□□□□□ -1.61 RIP-Chip
UBP3Q01477 YMR196WYMR196W 3267 nt5□□□□□ -1.61
UBP3Q01477 SSB2YNL209W 1842 nt5□□□□□ -1.61
UBP3Q01477 VHC1YBR235W 3363 nt5□□□□□ -1.61
UBP3Q01477 ATM1YMR301C 2073 nt5□□□□□ -1.61
UBP3Q01477 BLM10YFL007W 6432 nt5□□□□□ -1.61
UBP3Q01477 KRE6YPR159W 2163 nt5□□□□□ -1.61
UBP3Q01477 YCR075W-AYCR075W-A 228 nt5□□□□□ -1.61
UBP3Q01477 NOP6YDL213C 678 nt5□□□□□ -1.61
UBP3Q01477 YDR461C-AYDR461C-A 243 nt5□□□□□ -1.61
UBP3Q01477 SPO73YER046W 432 nt5□□□□□ -1.61
UBP3Q01477 YKL023C-AYKL023C-A 228 nt5□□□□□ -1.61
UBP3Q01477 SYM1YLR251W 594 nt5□□□□□ -1.61
UBP3Q01477 YLR252WYLR252W 306 nt5□□□□□ -1.61
UBP3Q01477 YML003WYML003W 873 nt5□□□□□ -1.61
UBP3Q01477 YBR016WYBR016W 387 nt5□□□□□ -1.61
UBP3Q01477 RFC5YBR087W 1065 nt5□□□□□ -1.61
UBP3Q01477 YCL021W-AYCL021W-A 378 nt5□□□□□ -1.61
UBP3Q01477 UBP6YFR010W 1500 nt5□□□□□ -1.61
UBP3Q01477 YGR266WYGR266W 2106 nt5□□□□□ -1.61
UBP3Q01477 APC4YDR118W 1959 nt5□□□□□ -1.61
UBP3Q01477 DSE1YER124C 1722 nt5□□□□□ -1.61 RIP-Chip
UBP3Q01477 MNT2YGL257C 1677 nt4.99□□□□□ -1.61
UBP3Q01477 AXL2YIL140W 2472 nt4.99□□□□□ -1.61
UBP3Q01477 SWI3YJL176C 2478 nt4.99□□□□□ -1.61
UBP3Q01477 MGT1YDL200C 567 nt4.99□□□□□ -1.61
UBP3Q01477 TFB3YDR460W 966 nt4.99□□□□□ -1.61 RIP-Chip
UBP3Q01477 YJR087WYJR087W 351 nt4.99□□□□□ -1.61
UBP3Q01477 RPL43BYJR094W-A 279 nt4.99□□□□□ -1.61 RIP-Chip
UBP3Q01477 YKR011CYKR011C 1062 nt4.99□□□□□ -1.61
UBP3Q01477 YMR105W-AYMR105W-A 195 nt4.99□□□□□ -1.61
UBP3Q01477 YNL146WYNL146W 303 nt4.99□□□□□ -1.61
UBP3Q01477 YOR387CYOR387C 621 nt4.99□□□□□ -1.61
UBP3Q01477 RET3YPL010W 570 nt4.99□□□□□ -1.61
UBP3Q01477 NTH1YDR001C 2256 nt4.99□□□□□ -1.61
UBP3Q01477 PRP31YGR091W 1485 nt4.99□□□□□ -1.61
UBP3Q01477 FLC1YPL221W 2382 nt4.99□□□□□ -1.61 RIP-Chip
UBP3Q01477 ASM4YDL088C 1587 nt4.99□□□□□ -1.61
UBP3Q01477 LHP1YDL051W 828 nt4.98□□□□□ -1.61 RIP-Chip
UBP3Q01477 YDR114CYDR114C 303 nt4.98□□□□□ -1.61
UBP3Q01477 RGI1YER067W 486 nt4.98□□□□□ -1.61 RIP-Chip
UBP3Q01477 THG1YGR024C 714 nt4.98□□□□□ -1.61
UBP3Q01477 ACP1YKL192C 378 nt4.98□□□□□ -1.61
UBP3Q01477 RNP1YLL046C 750 nt4.98□□□□□ -1.61
UBP3Q01477 MOH1YBL049W 417 nt4.98□□□□□ -1.61
UBP3Q01477 MRPL44YMR225C 297 nt4.98□□□□□ -1.61
UBP3Q01477 YPR174CYPR174C 666 nt4.98□□□□□ -1.61
UBP3Q01477 ARL1YBR164C 552 nt4.98□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 53.2 ms