Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEP78395 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PRAMEP78395 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.54■■□□□ 1.04
PRAMEP78395 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.54■■□□□ 1.04
PRAMEP78395 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEP78395 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEP78395 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEP78395 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEP78395 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PRAMEP78395 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PRAMEP78395 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEP78395 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PRAMEP78395 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.53■■□□□ 1.04
PRAMEP78395 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEP78395 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEP78395 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
PRAMEP78395 AC010542.4-201ENST00000563151 1910 ntBASIC21.53■■□□□ 1.04
PRAMEP78395 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEP78395 EDA-201ENST00000338901 1233 ntBASIC21.53■■□□□ 1.04
PRAMEP78395 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PRAMEP78395 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
PRAMEP78395 AC027682.1-201ENST00000562846 899 ntBASIC21.53■■□□□ 1.04
PRAMEP78395 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEP78395 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.53■■□□□ 1.04
PRAMEP78395 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEP78395 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.53■■□□□ 1.04
PRAMEP78395 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEP78395 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.53■■□□□ 1.04
PRAMEP78395 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.53■■□□□ 1.04
PRAMEP78395 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEP78395 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEP78395 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEP78395 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEP78395 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PRAMEP78395 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEP78395 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEP78395 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAMEP78395 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PRAMEP78395 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.52■■□□□ 1.04
PRAMEP78395 AC099791.1-201ENST00000416440 715 ntBASIC21.52■■□□□ 1.04
PRAMEP78395 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.52■■□□□ 1.04
PRAMEP78395 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.52■■□□□ 1.04
PRAMEP78395 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAMEP78395 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEP78395 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAMEP78395 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAMEP78395 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.52■■□□□ 1.04
PRAMEP78395 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PRAMEP78395 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PRAMEP78395 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PRAMEP78395 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.51■■□□□ 1.03
PRAMEP78395 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEP78395 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEP78395 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEP78395 IGHV3-19-201ENST00000521488 291 ntBASIC21.51■■□□□ 1.03
PRAMEP78395 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.51■■□□□ 1.03
PRAMEP78395 AL034346.1-201ENST00000568244 1277 ntBASIC21.51■■□□□ 1.03
PRAMEP78395 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEP78395 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.51■■□□□ 1.03
PRAMEP78395 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PRAMEP78395 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEP78395 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEP78395 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.51■■□□□ 1.03
PRAMEP78395 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEP78395 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
PRAMEP78395 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEP78395 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.5■■□□□ 1.03
PRAMEP78395 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEP78395 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.5■■□□□ 1.03
PRAMEP78395 AL355001.2-201ENST00000620617 1191 ntBASIC21.5■■□□□ 1.03
PRAMEP78395 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.5■■□□□ 1.03
PRAMEP78395 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEP78395 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.5■■□□□ 1.03
PRAMEP78395 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEP78395 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.49■■□□□ 1.03
PRAMEP78395 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEP78395 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PRAMEP78395 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEP78395 AP001330.3-201ENST00000520123 633 ntBASIC21.49■■□□□ 1.03
PRAMEP78395 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.49■■□□□ 1.03
PRAMEP78395 AL024507.2-201ENST00000606070 2574 ntBASIC21.49■■□□□ 1.03
PRAMEP78395 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEP78395 AP004607.7-201ENST00000527152 1677 ntBASIC21.49■■□□□ 1.03
PRAMEP78395 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEP78395 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.49■■□□□ 1.03
PRAMEP78395 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEP78395 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.48■■□□□ 1.03
PRAMEP78395 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.48■■□□□ 1.03
PRAMEP78395 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEP78395 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.48■■□□□ 1.03
PRAMEP78395 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEP78395 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEP78395 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEP78395 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.48■■□□□ 1.03
PRAMEP78395 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEP78395 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.48■■□□□ 1.03
PRAMEP78395 AC133561.4-201ENST00000566112 224 ntBASIC21.48■■□□□ 1.03
PRAMEP78395 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.48■■□□□ 1.03
PRAMEP78395 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PRAMEP78395 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms