Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RASA4CP-201ENST00000424092 1398 ntBASIC18.73■□□□□ 0.59
HIST1H3AP68431 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H3AP68431 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.73■□□□□ 0.59
HIST1H3AP68431 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.73■□□□□ 0.59
HIST1H3AP68431 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.73■□□□□ 0.59
HIST1H3AP68431 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.73■□□□□ 0.59
HIST1H3AP68431 AL136967.2-201ENST00000623968 743 ntBASIC18.73■□□□□ 0.59
HIST1H3AP68431 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H3AP68431 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H3AP68431 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 SUDS3P1-201ENST00000505831 966 ntBASIC18.72■□□□□ 0.59
HIST1H3AP68431 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 AF213884.3-201ENST00000563833 479 ntBASIC18.72■□□□□ 0.59
HIST1H3AP68431 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 AL139246.5-201ENST00000606645 996 ntBASIC18.72■□□□□ 0.59
HIST1H3AP68431 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H3AP68431 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H3AP68431 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H3AP68431 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H3AP68431 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H3AP68431 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HIST1H3AP68431 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H3AP68431 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H3AP68431 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.71■□□□□ 0.59
HIST1H3AP68431 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H3AP68431 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HIST1H3AP68431 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.71■□□□□ 0.59
HIST1H3AP68431 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H3AP68431 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H3AP68431 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.71■□□□□ 0.59
HIST1H3AP68431 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.71■□□□□ 0.59
HIST1H3AP68431 AC091305.1-201ENST00000479476 895 ntBASIC18.71■□□□□ 0.59
HIST1H3AP68431 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H3AP68431 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HIST1H3AP68431 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H3AP68431 TSPY26P-201ENST00000476365 1326 ntBASIC18.71■□□□□ 0.59
HIST1H3AP68431 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H3AP68431 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.71■□□□□ 0.59
HIST1H3AP68431 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HIST1H3AP68431 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HIST1H3AP68431 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HIST1H3AP68431 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H3AP68431 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H3AP68431 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.7■□□□□ 0.58
HIST1H3AP68431 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.7■□□□□ 0.58
HIST1H3AP68431 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H3AP68431 AC104564.3-201ENST00000582367 638 ntBASIC18.7■□□□□ 0.58
HIST1H3AP68431 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H3AP68431 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H3AP68431 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
HIST1H3AP68431 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.7■□□□□ 0.58
HIST1H3AP68431 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.69■□□□□ 0.58
HIST1H3AP68431 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.69■□□□□ 0.58
HIST1H3AP68431 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.69■□□□□ 0.58
HIST1H3AP68431 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HIST1H3AP68431 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HIST1H3AP68431 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HIST1H3AP68431 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HIST1H3AP68431 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H3AP68431 AP006587.3-201ENST00000525742 1516 ntBASIC18.69■□□□□ 0.58
HIST1H3AP68431 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HIST1H3AP68431 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H3AP68431 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HIST1H3AP68431 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 MIR572-201ENST00000384983 95 ntBASIC18.68■□□□□ 0.58
HIST1H3AP68431 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST1H3AP68431 AC007375.3-201ENST00000600936 2314 ntBASIC18.68■□□□□ 0.58
HIST1H3AP68431 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H3AP68431 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H3AP68431 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms