Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4XP62701 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4XP62701 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4XP62701 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4XP62701 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4XP62701 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4XP62701 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4XP62701 AC099791.1-201ENST00000416440 715 ntBASIC19.35■□□□□ 0.69
RPS4XP62701 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.35■□□□□ 0.69
RPS4XP62701 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4XP62701 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4XP62701 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4XP62701 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
RPS4XP62701 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4XP62701 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4XP62701 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4XP62701 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.34■□□□□ 0.69
RPS4XP62701 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4XP62701 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4XP62701 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4XP62701 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4XP62701 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4XP62701 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4XP62701 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4XP62701 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4XP62701 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.34■□□□□ 0.69
RPS4XP62701 MIR6821-201ENST00000617625 74 ntBASIC19.34■□□□□ 0.69
RPS4XP62701 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.34■□□□□ 0.69
RPS4XP62701 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS4XP62701 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RPS4XP62701 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RPS4XP62701 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS4XP62701 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RPS4XP62701 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS4XP62701 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RPS4XP62701 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS4XP62701 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS4XP62701 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RPS4XP62701 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.33■□□□□ 0.68
RPS4XP62701 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.33■□□□□ 0.68
RPS4XP62701 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.33■□□□□ 0.68
RPS4XP62701 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RPS4XP62701 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RPS4XP62701 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4XP62701 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.32■□□□□ 0.68
RPS4XP62701 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.32■□□□□ 0.68
RPS4XP62701 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RPS4XP62701 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.32■□□□□ 0.68
RPS4XP62701 IRS3P-201ENST00000223076 1006 ntBASIC19.32■□□□□ 0.68
RPS4XP62701 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RPS4XP62701 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.32■□□□□ 0.68
RPS4XP62701 AC097381.1-201ENST00000429019 1296 ntBASIC19.32■□□□□ 0.68
RPS4XP62701 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4XP62701 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.32■□□□□ 0.68
RPS4XP62701 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4XP62701 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4XP62701 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4XP62701 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4XP62701 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPS4XP62701 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
RPS4XP62701 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RPS4XP62701 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4XP62701 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4XP62701 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4XP62701 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.31■□□□□ 0.68
RPS4XP62701 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.31■□□□□ 0.68
RPS4XP62701 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4XP62701 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.31■□□□□ 0.68
RPS4XP62701 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4XP62701 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.31■□□□□ 0.68
RPS4XP62701 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.31■□□□□ 0.68
RPS4XP62701 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS4XP62701 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RPS4XP62701 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPS4XP62701 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPS4XP62701 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 Z98882.1-201ENST00000622160 2253 ntBASIC19.3■□□□□ 0.68
RPS4XP62701 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.3■□□□□ 0.68
RPS4XP62701 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.3■□□□□ 0.68
RPS4XP62701 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RPS4XP62701 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.3■□□□□ 0.68
RPS4XP62701 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RPS4XP62701 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS4XP62701 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS4XP62701 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
RPS4XP62701 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4XP62701 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4XP62701 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4XP62701 AL034346.1-201ENST00000568244 1277 ntBASIC19.29■□□□□ 0.68
RPS4XP62701 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS4XP62701 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS4XP62701 AC233992.3-201ENST00000607491 485 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms