Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN20P56880 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN20P56880 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN20P56880 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN20P56880 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.57■□□□□ 0.72
CLDN20P56880 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN20P56880 AC026271.2-201ENST00000428091 497 ntBASIC19.57■□□□□ 0.72
CLDN20P56880 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN20P56880 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.57■□□□□ 0.72
CLDN20P56880 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN20P56880 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.57■□□□□ 0.72
CLDN20P56880 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN20P56880 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN20P56880 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.57■□□□□ 0.72
CLDN20P56880 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN20P56880 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CLDN20P56880 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN20P56880 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN20P56880 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLDN20P56880 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN20P56880 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CLDN20P56880 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN20P56880 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN20P56880 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN20P56880 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN20P56880 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN20P56880 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN20P56880 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.56■□□□□ 0.72
CLDN20P56880 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN20P56880 AL354811.1-201ENST00000610286 706 ntBASIC19.56■□□□□ 0.72
CLDN20P56880 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN20P56880 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN20P56880 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLDN20P56880 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.56■□□□□ 0.72
CLDN20P56880 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN20P56880 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLDN20P56880 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN20P56880 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN20P56880 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDN20P56880 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLDN20P56880 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CLDN20P56880 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN20P56880 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CLDN20P56880 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN20P56880 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
CLDN20P56880 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDN20P56880 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN20P56880 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.54■□□□□ 0.72
CLDN20P56880 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN20P56880 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 SMUG1P1-201ENST00000590640 811 ntBASIC19.54■□□□□ 0.72
CLDN20P56880 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN20P56880 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN20P56880 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN20P56880 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLDN20P56880 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN20P56880 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN20P56880 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN20P56880 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN20P56880 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN20P56880 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CLDN20P56880 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN20P56880 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CLDN20P56880 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN20P56880 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN20P56880 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN20P56880 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLDN20P56880 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN20P56880 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN20P56880 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN20P56880 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN20P56880 AC027612.3-201ENST00000413684 1047 ntBASIC19.52■□□□□ 0.72
CLDN20P56880 AC097381.1-201ENST00000429019 1296 ntBASIC19.52■□□□□ 0.72
CLDN20P56880 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN20P56880 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.52■□□□□ 0.72
CLDN20P56880 MIR6821-201ENST00000617625 74 ntBASIC19.52■□□□□ 0.72
CLDN20P56880 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN20P56880 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CLDN20P56880 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN20P56880 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN20P56880 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN20P56880 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN20P56880 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.51■□□□□ 0.71
CLDN20P56880 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN20P56880 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN20P56880 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN20P56880 AC079089.2-201ENST00000531211 1277 ntBASIC19.51■□□□□ 0.71
CLDN20P56880 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN20P56880 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN20P56880 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN20P56880 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN20P56880 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms