Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN18P56856 AC104187.1-201ENST00000607510 612 ntBASIC19.18■□□□□ 0.66
CLDN18P56856 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN18P56856 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN18P56856 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN18P56856 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN18P56856 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN18P56856 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN18P56856 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN18P56856 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN18P56856 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN18P56856 AC092053.2-201ENST00000640557 1818 ntBASIC19.17■□□□□ 0.66
CLDN18P56856 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN18P56856 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CLDN18P56856 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN18P56856 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN18P56856 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN18P56856 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN18P56856 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN18P56856 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLDN18P56856 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN18P56856 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN18P56856 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN18P56856 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN18P56856 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CLDN18P56856 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CLDN18P56856 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN18P56856 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN18P56856 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN18P56856 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN18P56856 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN18P56856 AC004911.1-201ENST00000416316 871 ntBASIC19.16■□□□□ 0.66
CLDN18P56856 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN18P56856 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN18P56856 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN18P56856 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN18P56856 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN18P56856 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN18P56856 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN18P56856 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN18P56856 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN18P56856 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN18P56856 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLDN18P56856 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN18P56856 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN18P56856 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN18P56856 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN18P56856 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN18P56856 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN18P56856 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN18P56856 AC016769.1-201ENST00000409132 1010 ntBASIC19.15■□□□□ 0.66
CLDN18P56856 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN18P56856 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN18P56856 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN18P56856 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.15■□□□□ 0.66
CLDN18P56856 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLDN18P56856 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN18P56856 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN18P56856 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN18P56856 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN18P56856 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN18P56856 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.14■□□□□ 0.66
CLDN18P56856 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.14■□□□□ 0.66
CLDN18P56856 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CLDN18P56856 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN18P56856 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN18P56856 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN18P56856 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN18P56856 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.14■□□□□ 0.65
CLDN18P56856 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN18P56856 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN18P56856 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN18P56856 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN18P56856 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN18P56856 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN18P56856 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN18P56856 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN18P56856 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN18P56856 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN18P56856 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN18P56856 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN18P56856 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN18P56856 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN18P56856 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN18P56856 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
CLDN18P56856 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN18P56856 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN18P56856 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN18P56856 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN18P56856 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CLDN18P56856 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN18P56856 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN18P56856 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN18P56856 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLDN18P56856 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN18P56856 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN18P56856 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN18P56856 EEF1DP3-203ENST00000566025 782 ntBASIC19.12■□□□□ 0.65
CLDN18P56856 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN18P56856 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms