Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN12P56749 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN12P56749 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN12P56749 LINC01006-201ENST00000333319 2292 ntBASIC18.57■□□□□ 0.56
CLDN12P56749 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN12P56749 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN12P56749 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN12P56749 AC021242.3-201ENST00000607598 1377 ntBASIC18.56■□□□□ 0.56
CLDN12P56749 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN12P56749 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN12P56749 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN12P56749 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.56■□□□□ 0.56
CLDN12P56749 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN12P56749 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN12P56749 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN12P56749 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN12P56749 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN12P56749 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN12P56749 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN12P56749 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN12P56749 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN12P56749 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN12P56749 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN12P56749 C17orf82-201ENST00000623772 1530 ntBASIC18.55■□□□□ 0.56
CLDN12P56749 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN12P56749 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLDN12P56749 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN12P56749 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN12P56749 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CLDN12P56749 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN12P56749 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN12P56749 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN12P56749 AL031848.2-201ENST00000607670 837 ntBASIC18.55■□□□□ 0.56
CLDN12P56749 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN12P56749 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN12P56749 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLDN12P56749 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN12P56749 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN12P56749 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN12P56749 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN12P56749 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN12P56749 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLDN12P56749 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN12P56749 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN12P56749 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN12P56749 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN12P56749 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN12P56749 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLDN12P56749 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN12P56749 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN12P56749 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN12P56749 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN12P56749 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
CLDN12P56749 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN12P56749 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN12P56749 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN12P56749 AL033527.3-201ENST00000566366 1196 ntBASIC18.53■□□□□ 0.56
CLDN12P56749 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN12P56749 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN12P56749 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN12P56749 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN12P56749 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN12P56749 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN12P56749 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CLDN12P56749 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN12P56749 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN12P56749 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN12P56749 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN12P56749 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLDN12P56749 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN12P56749 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN12P56749 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
CLDN12P56749 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.52■□□□□ 0.55
CLDN12P56749 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN12P56749 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN12P56749 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN12P56749 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN12P56749 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN12P56749 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN12P56749 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN12P56749 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN12P56749 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN12P56749 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN12P56749 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN12P56749 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN12P56749 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN12P56749 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN12P56749 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms