Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
FOXG1P55316 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXG1P55316 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXG1P55316 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXG1P55316 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXG1P55316 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXG1P55316 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
FOXG1P55316 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXG1P55316 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXG1P55316 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXG1P55316 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FOXG1P55316 AL117328.2-201ENST00000624617 1940 ntBASIC18.83■□□□□ 0.6
FOXG1P55316 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.83■□□□□ 0.6
FOXG1P55316 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.83■□□□□ 0.6
FOXG1P55316 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.83■□□□□ 0.6
FOXG1P55316 NTF6G-201ENST00000591094 616 ntBASIC18.83■□□□□ 0.6
FOXG1P55316 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
FOXG1P55316 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.83■□□□□ 0.6
FOXG1P55316 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.83■□□□□ 0.6
FOXG1P55316 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
FOXG1P55316 AP006587.3-201ENST00000525742 1516 ntBASIC18.83■□□□□ 0.6
FOXG1P55316 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
FOXG1P55316 ECEL1P1-201ENST00000373592 1742 ntBASIC18.83■□□□□ 0.6
FOXG1P55316 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXG1P55316 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXG1P55316 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXG1P55316 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.82■□□□□ 0.6
FOXG1P55316 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXG1P55316 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
FOXG1P55316 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXG1P55316 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXG1P55316 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXG1P55316 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
FOXG1P55316 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXG1P55316 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXG1P55316 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXG1P55316 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXG1P55316 AC004854.2-201ENST00000608450 1441 ntBASIC18.82■□□□□ 0.6
FOXG1P55316 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXG1P55316 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXG1P55316 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXG1P55316 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXG1P55316 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXG1P55316 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXG1P55316 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXG1P55316 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
FOXG1P55316 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXG1P55316 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.81■□□□□ 0.6
FOXG1P55316 AC079140.4-201ENST00000507448 529 ntBASIC18.81■□□□□ 0.6
FOXG1P55316 AL034346.1-201ENST00000568244 1277 ntBASIC18.81■□□□□ 0.6
FOXG1P55316 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.81■□□□□ 0.6
FOXG1P55316 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXG1P55316 AP004607.4-201ENST00000530158 1459 ntBASIC18.81■□□□□ 0.6
FOXG1P55316 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXG1P55316 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXG1P55316 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXG1P55316 FAM99A-202ENST00000538190 1989 ntBASIC18.81■□□□□ 0.6
FOXG1P55316 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXG1P55316 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXG1P55316 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXG1P55316 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXG1P55316 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXG1P55316 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXG1P55316 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXG1P55316 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.8■□□□□ 0.6
FOXG1P55316 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXG1P55316 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXG1P55316 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXG1P55316 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FOXG1P55316 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXG1P55316 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXG1P55316 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXG1P55316 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXG1P55316 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXG1P55316 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXG1P55316 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXG1P55316 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXG1P55316 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXG1P55316 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXG1P55316 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
FOXG1P55316 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXG1P55316 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
FOXG1P55316 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXG1P55316 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXG1P55316 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXG1P55316 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXG1P55316 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXG1P55316 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXG1P55316 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FOXG1P55316 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXG1P55316 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXG1P55316 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXG1P55316 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXG1P55316 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.78■□□□□ 0.6
FOXG1P55316 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXG1P55316 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXG1P55316 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FOXG1P55316 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXG1P55316 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FOXG1P55316 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms