Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF140P52738 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF140P52738 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF140P52738 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.38■■□□□ 1.01
ZNF140P52738 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
ZNF140P52738 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
ZNF140P52738 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.38■■□□□ 1.01
ZNF140P52738 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF140P52738 IRS3P-201ENST00000223076 1006 ntBASIC21.38■■□□□ 1.01
ZNF140P52738 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.38■■□□□ 1.01
ZNF140P52738 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.38■■□□□ 1.01
ZNF140P52738 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF140P52738 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.38■■□□□ 1.01
ZNF140P52738 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.38■■□□□ 1.01
ZNF140P52738 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.38■■□□□ 1.01
ZNF140P52738 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF140P52738 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF140P52738 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF140P52738 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF140P52738 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF140P52738 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF140P52738 AC009237.3-201ENST00000393279 1427 ntBASIC21.38■■□□□ 1.01
ZNF140P52738 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF140P52738 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF140P52738 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF140P52738 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF140P52738 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ZNF140P52738 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF140P52738 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
ZNF140P52738 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
ZNF140P52738 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF140P52738 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF140P52738 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF140P52738 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF140P52738 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ZNF140P52738 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
ZNF140P52738 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF140P52738 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.36■■□□□ 1.01
ZNF140P52738 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
ZNF140P52738 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF140P52738 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF140P52738 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.36■■□□□ 1.01
ZNF140P52738 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.36■■□□□ 1.01
ZNF140P52738 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ZNF140P52738 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
ZNF140P52738 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.36■■□□□ 1.01
ZNF140P52738 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.36■■□□□ 1.01
ZNF140P52738 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.36■■□□□ 1.01
ZNF140P52738 MIR6084-201ENST00000622012 110 ntBASIC21.36■■□□□ 1.01
ZNF140P52738 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ZNF140P52738 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.36■■□□□ 1.01
ZNF140P52738 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.36■■□□□ 1.01
ZNF140P52738 AC003102.1-202ENST00000563394 1796 ntBASIC21.36■■□□□ 1.01
ZNF140P52738 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF140P52738 AC055733.4-201ENST00000638462 1354 ntBASIC21.36■■□□□ 1.01
ZNF140P52738 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF140P52738 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF140P52738 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF140P52738 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ZNF140P52738 AC005224.4-201ENST00000583262 1652 ntBASIC21.35■■□□□ 1.01
ZNF140P52738 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF140P52738 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.35■■□□□ 1.01
ZNF140P52738 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF140P52738 TPRG1LP1-201ENST00000598702 760 ntBASIC21.35■■□□□ 1.01
ZNF140P52738 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.35■■□□□ 1.01
ZNF140P52738 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ZNF140P52738 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF140P52738 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF140P52738 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF140P52738 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.34■■□□□ 1.01
ZNF140P52738 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF140P52738 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF140P52738 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.34■■□□□ 1.01
ZNF140P52738 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ZNF140P52738 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF140P52738 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF140P52738 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.34■■□□□ 1.01
ZNF140P52738 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.34■■□□□ 1.01
ZNF140P52738 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF140P52738 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF140P52738 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF140P52738 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.34■■□□□ 1.01
ZNF140P52738 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF140P52738 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.33■■□□□ 1.01
ZNF140P52738 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF140P52738 AC244015.2-201ENST00000616358 1861 ntBASIC21.33■■□□□ 1.01
ZNF140P52738 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF140P52738 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.33■■□□□ 1.01
ZNF140P52738 ZNRF2P3-201ENST00000424200 374 ntBASIC21.33■■□□□ 1.01
ZNF140P52738 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF140P52738 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
ZNF140P52738 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.33■■□□□ 1
ZNF140P52738 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF140P52738 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF140P52738 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF140P52738 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.32■■□□□ 1
ZNF140P52738 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.32■■□□□ 1
ZNF140P52738 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.32■■□□□ 1
ZNF140P52738 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF140P52738 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms