Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.63■□□□□ 0.41
THBS3P49746 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS3P49746 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS3P49746 PBX2P1-201ENST00000493219 1291 ntBASIC17.63■□□□□ 0.41
THBS3P49746 AC079089.2-201ENST00000531211 1277 ntBASIC17.63■□□□□ 0.41
THBS3P49746 MIR3181-201ENST00000578512 73 ntBASIC17.63■□□□□ 0.41
THBS3P49746 AC106739.1-201ENST00000617035 715 ntBASIC17.63■□□□□ 0.41
THBS3P49746 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
THBS3P49746 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
THBS3P49746 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
THBS3P49746 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.63■□□□□ 0.41
THBS3P49746 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS3P49746 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THBS3P49746 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
THBS3P49746 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.63■□□□□ 0.41
THBS3P49746 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.62■□□□□ 0.41
THBS3P49746 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.62■□□□□ 0.41
THBS3P49746 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.62■□□□□ 0.41
THBS3P49746 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 UNC93B3-201ENST00000308076 687 ntBASIC17.62■□□□□ 0.41
THBS3P49746 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
THBS3P49746 OR2I1P-207ENST00000453522 948 ntBASIC17.62■□□□□ 0.41
THBS3P49746 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 AC087239.1-201ENST00000622671 572 ntBASIC17.62■□□□□ 0.41
THBS3P49746 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.62■□□□□ 0.41
THBS3P49746 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
THBS3P49746 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
THBS3P49746 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
THBS3P49746 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THBS3P49746 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS3P49746 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
THBS3P49746 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS3P49746 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS3P49746 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
THBS3P49746 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.61■□□□□ 0.41
THBS3P49746 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS3P49746 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS3P49746 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS3P49746 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.61■□□□□ 0.41
THBS3P49746 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS3P49746 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.61■□□□□ 0.41
THBS3P49746 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.61■□□□□ 0.41
THBS3P49746 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THBS3P49746 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
THBS3P49746 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.6■□□□□ 0.41
THBS3P49746 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.6■□□□□ 0.41
THBS3P49746 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.6■□□□□ 0.41
THBS3P49746 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
THBS3P49746 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.6■□□□□ 0.41
THBS3P49746 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.6■□□□□ 0.41
THBS3P49746 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
THBS3P49746 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
THBS3P49746 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THBS3P49746 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THBS3P49746 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
THBS3P49746 AC010542.4-201ENST00000563151 1910 ntBASIC17.59■□□□□ 0.41
THBS3P49746 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THBS3P49746 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.59■□□□□ 0.41
THBS3P49746 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THBS3P49746 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THBS3P49746 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
THBS3P49746 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
THBS3P49746 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
THBS3P49746 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.59■□□□□ 0.41
THBS3P49746 AL136162.1-201ENST00000607711 1078 ntBASIC17.59■□□□□ 0.41
THBS3P49746 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.59■□□□□ 0.41
THBS3P49746 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THBS3P49746 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.59■□□□□ 0.41
THBS3P49746 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
THBS3P49746 FAM99A-202ENST00000538190 1989 ntBASIC17.59■□□□□ 0.41
THBS3P49746 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
THBS3P49746 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THBS3P49746 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THBS3P49746 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
THBS3P49746 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.58■□□□□ 0.41
THBS3P49746 OR7E47P-201ENST00000546390 1422 ntBASIC17.58■□□□□ 0.41
THBS3P49746 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
THBS3P49746 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms