Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 tK(UUU)DtK(UUU)D 73 nt2.69□□□□□ -1.98
LSM1P47017 tK(UUU)G1tK(UUU)G1 73 nt2.69□□□□□ -1.98
LSM1P47017 tK(UUU)G2tK(UUU)G2 73 nt2.69□□□□□ -1.98
LSM1P47017 tK(UUU)KtK(UUU)K 73 nt2.69□□□□□ -1.98
LSM1P47017 tK(UUU)LtK(UUU)L 73 nt2.69□□□□□ -1.98
LSM1P47017 tK(UUU)OtK(UUU)O 73 nt2.69□□□□□ -1.98
LSM1P47017 tK(UUU)PtK(UUU)P 73 nt2.69□□□□□ -1.98
LSM1P47017 SDT1YGL224C 843 nt2.69□□□□□ -1.98
LSM1P47017 COX18YGR062C 951 nt2.69□□□□□ -1.98
LSM1P47017 AIM26YKL037W 357 nt2.69□□□□□ -1.98
LSM1P47017 RCE1YMR274C 948 nt2.69□□□□□ -1.98
LSM1P47017 NIP7YPL211W 546 nt2.69□□□□□ -1.98
LSM1P47017 CDC55YGL190C 1581 nt2.69□□□□□ -1.98
LSM1P47017 YGR027W-BYGR027W-B 5268 nt2.69□□□□□ -1.98
LSM1P47017 YLR227W-BYLR227W-B 5268 nt2.69□□□□□ -1.98
LSM1P47017 YPR158C-DYPR158C-D 5268 nt2.69□□□□□ -1.98
LSM1P47017 PSK1YAL017W 4071 nt2.68□□□□□ -1.98
LSM1P47017 MEF1YLR069C 2286 nt2.68□□□□□ -1.98
LSM1P47017 SHQ1YIL104C 1524 nt2.68□□□□□ -1.98
LSM1P47017 NTO1YPR031W 2247 nt2.68□□□□□ -1.98
LSM1P47017 RIM1YCR028C-A 408 nt2.68□□□□□ -1.98
LSM1P47017 TLG1YDR468C 675 nt2.68□□□□□ -1.98
LSM1P47017 tQ(UUG)BtQ(UUG)B 72 nt2.68□□□□□ -1.98
LSM1P47017 PPA2YMR267W 933 nt2.68□□□□□ -1.98
LSM1P47017 LCL1YPL056C 306 nt2.68□□□□□ -1.98
LSM1P47017 SRP68YPL243W 1800 nt2.68□□□□□ -1.98
LSM1P47017 CHS3YBR023C 3498 nt2.67□□□□□ -1.98
LSM1P47017 CYR1YJL005W 6081 nt2.67□□□□□ -1.98
LSM1P47017 SDS23YGL056C 1584 nt2.67□□□□□ -1.98
LSM1P47017 TOS8YGL096W 831 nt2.67□□□□□ -1.98
LSM1P47017 CSM3YMR048W 954 nt2.67□□□□□ -1.98
LSM1P47017 AIM39YOL053W 1188 nt2.67□□□□□ -1.98
LSM1P47017 ARA1YBR149W 1035 nt2.67□□□□□ -1.98
LSM1P47017 RIX1YHR197W 2292 nt2.67□□□□□ -1.98
LSM1P47017 DIA2YOR080W 2199 nt2.67□□□□□ -1.98
LSM1P47017 MTL1YGR023W 1656 nt2.66□□□□□ -1.98
LSM1P47017 ESC1YMR219W 4977 nt2.66□□□□□ -1.98
LSM1P47017 YNR063WYNR063W 1824 nt2.66□□□□□ -1.98
LSM1P47017 GEA1YJR031C 4227 nt2.66□□□□□ -1.98
LSM1P47017 SMT3YDR510W 306 nt2.66□□□□□ -1.98
LSM1P47017 HPA3YEL066W 540 nt2.66□□□□□ -1.98
LSM1P47017 CDC26YFR036W 375 nt2.66□□□□□ -1.98
LSM1P47017 SPC34YKR037C 888 nt2.66□□□□□ -1.98
LSM1P47017 YLR326WYLR326W 723 nt2.66□□□□□ -1.98
LSM1P47017 RSF1YMR030W 1131 nt2.66□□□□□ -1.98
LSM1P47017 IMP4YNL075W 873 nt2.66□□□□□ -1.98
LSM1P47017 YNL109WYNL109W 546 nt2.66□□□□□ -1.98
LSM1P47017 NOP4YPL043W 2058 nt2.65□□□□□ -1.98
LSM1P47017 CAF120YNL278W 3183 nt2.65□□□□□ -1.98
LSM1P47017 MET6YER091C 2304 nt2.65□□□□□ -1.98
LSM1P47017 PSY2YNL201C 2577 nt2.65□□□□□ -1.98
LSM1P47017 PRP31YGR091W 1485 nt2.65□□□□□ -1.98
LSM1P47017 YPL109CYPL109C 1974 nt2.65□□□□□ -1.98
LSM1P47017 UTP14YML093W 2700 nt2.65□□□□□ -1.98
LSM1P47017 RAD55YDR076W 1221 nt2.65□□□□□ -1.99
LSM1P47017 ENT5YDR153C 1236 nt2.65□□□□□ -1.99
LSM1P47017 PEX14YGL153W 1026 nt2.65□□□□□ -1.99
LSM1P47017 YHL005CYHL005C 393 nt2.65□□□□□ -1.99
LSM1P47017 YBR116CYBR116C 528 nt2.65□□□□□ -1.99
LSM1P47017 DSL1YNL258C 2265 nt2.65□□□□□ -1.99
LSM1P47017 TGL1YKL140W 1647 nt2.64□□□□□ -1.99
LSM1P47017 NSA1YGL111W 1392 nt2.64□□□□□ -1.99
LSM1P47017 DSE4YNR067C 3354 nt2.64□□□□□ -1.99
LSM1P47017 IRC18YJL037W 675 nt2.64□□□□□ -1.99
LSM1P47017 GCD14YJL125C 1152 nt2.64□□□□□ -1.99
LSM1P47017 RPS31YLR167W 459 nt2.64□□□□□ -1.99
LSM1P47017 CPR3YML078W 549 nt2.64□□□□□ -1.99
LSM1P47017 MPD2YOL088C 834 nt2.64□□□□□ -1.99
LSM1P47017 INO4YOL108C 456 nt2.64□□□□□ -1.99
LSM1P47017 ATG29YPL166W 642 nt2.64□□□□□ -1.99
LSM1P47017 CWC22YGR278W 1734 nt2.64□□□□□ -1.99
LSM1P47017 TAF2YCR042C 4224 nt2.64□□□□□ -1.99
LSM1P47017 YPR148CYPR148C 1308 nt2.64□□□□□ -1.99
LSM1P47017 YOR296WYOR296W 3870 nt2.64□□□□□ -1.99
LSM1P47017 MGR3YMR115W 1506 nt2.63□□□□□ -1.99
LSM1P47017 EFG1YGR271C-A 702 nt2.63□□□□□ -1.99
LSM1P47017 RPL17BYJL177W 555 nt2.63□□□□□ -1.99
LSM1P47017 AAH1YNL141W 1044 nt2.63□□□□□ -1.99
LSM1P47017 MRPL51YPR100W 423 nt2.63□□□□□ -1.99
LSM1P47017 POL3YDL102W 3294 nt2.63□□□□□ -1.99
LSM1P47017 SAD1YFR005C 1347 nt2.63□□□□□ -1.99
LSM1P47017 VPS30YPL120W 1674 nt2.63□□□□□ -1.99
LSM1P47017 ECM21YBL101C 3354 nt2.63□□□□□ -1.99
LSM1P47017 APM1YPL259C 1428 nt2.62□□□□□ -1.99
LSM1P47017 NMD2YHR077C 3270 nt2.62□□□□□ -1.99
LSM1P47017 MOB2YFL034C-B 864 nt2.62□□□□□ -1.99
LSM1P47017 YJL028WYJL028W 336 nt2.62□□□□□ -1.99
LSM1P47017 YJR056CYJR056C 711 nt2.62□□□□□ -1.99
LSM1P47017 GLO1YML004C 981 nt2.62□□□□□ -1.99
LSM1P47017 MRPL16YBL038W 699 nt2.62□□□□□ -1.99
LSM1P47017 HUB1YNR032C-A 222 nt2.62□□□□□ -1.99
LSM1P47017 RSM19YNR037C 276 nt2.62□□□□□ -1.99
LSM1P47017 ALG5YPL227C 1005 nt2.62□□□□□ -1.99
LSM1P47017 SHE3YBR130C 1278 nt2.62□□□□□ -1.99
LSM1P47017 EPL1YFL024C 2499 nt2.62□□□□□ -1.99
LSM1P47017 SOK1YDR006C 2706 nt2.62□□□□□ -1.99
LSM1P47017 SIN4YNL236W 2925 nt2.62□□□□□ -1.99
LSM1P47017 SEC27YGL137W 2670 nt2.61□□□□□ -1.99
LSM1P47017 RRT13YER066W 558 nt2.61□□□□□ -1.99
LSM1P47017 YLR297WYLR297W 390 nt2.61□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 41.6 ms