Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.32■□□□□ 0.52
CBX5P45973 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX5P45973 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX5P45973 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX5P45973 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX5P45973 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CBX5P45973 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CBX5P45973 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.32■□□□□ 0.52
CBX5P45973 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX5P45973 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX5P45973 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX5P45973 MIR4508-201ENST00000584178 70 ntBASIC18.32■□□□□ 0.52
CBX5P45973 HSD17B1P1-201ENST00000590052 955 ntBASIC18.32■□□□□ 0.52
CBX5P45973 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX5P45973 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CBX5P45973 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CBX5P45973 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX5P45973 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.32■□□□□ 0.52
CBX5P45973 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX5P45973 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX5P45973 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CBX5P45973 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.31■□□□□ 0.52
CBX5P45973 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.31■□□□□ 0.52
CBX5P45973 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.31■□□□□ 0.52
CBX5P45973 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CBX5P45973 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.31■□□□□ 0.52
CBX5P45973 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CBX5P45973 AC004687.1-201ENST00000579003 1625 ntBASIC18.31■□□□□ 0.52
CBX5P45973 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CBX5P45973 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CBX5P45973 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CBX5P45973 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.3■□□□□ 0.52
CBX5P45973 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX5P45973 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CBX5P45973 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CBX5P45973 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX5P45973 ABHD17AP5-201ENST00000580133 923 ntBASIC18.3■□□□□ 0.52
CBX5P45973 AC010980.1-201ENST00000587192 1142 ntBASIC18.3■□□□□ 0.52
CBX5P45973 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX5P45973 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CBX5P45973 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CBX5P45973 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.3■□□□□ 0.52
CBX5P45973 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CBX5P45973 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CBX5P45973 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX5P45973 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.29■□□□□ 0.52
CBX5P45973 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX5P45973 Z98882.1-201ENST00000622160 2253 ntBASIC18.29■□□□□ 0.52
CBX5P45973 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.29■□□□□ 0.52
CBX5P45973 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX5P45973 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX5P45973 ATP5G2P3-201ENST00000429083 425 ntBASIC18.29■□□□□ 0.52
CBX5P45973 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CBX5P45973 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX5P45973 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
CBX5P45973 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX5P45973 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX5P45973 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.29■□□□□ 0.52
CBX5P45973 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CBX5P45973 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.29■□□□□ 0.52
CBX5P45973 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CBX5P45973 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CBX5P45973 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX5P45973 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CBX5P45973 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CBX5P45973 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CBX5P45973 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CBX5P45973 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX5P45973 AC137630.3-201ENST00000607245 391 ntBASIC18.28■□□□□ 0.52
CBX5P45973 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX5P45973 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.28■□□□□ 0.52
CBX5P45973 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX5P45973 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX5P45973 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX5P45973 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX5P45973 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CBX5P45973 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.27■□□□□ 0.52
CBX5P45973 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms