Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
GDNFP39905 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GDNFP39905 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.55■□□□□ 0.56
GDNFP39905 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 LINC01006-201ENST00000333319 2292 ntBASIC18.55■□□□□ 0.56
GDNFP39905 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
GDNFP39905 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.55■□□□□ 0.56
GDNFP39905 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.55■□□□□ 0.56
GDNFP39905 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.55■□□□□ 0.56
GDNFP39905 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDNFP39905 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.54■□□□□ 0.56
GDNFP39905 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
GDNFP39905 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
GDNFP39905 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GDNFP39905 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.54■□□□□ 0.56
GDNFP39905 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GDNFP39905 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDNFP39905 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.54■□□□□ 0.56
GDNFP39905 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.53■□□□□ 0.56
GDNFP39905 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.53■□□□□ 0.56
GDNFP39905 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.53■□□□□ 0.56
GDNFP39905 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GDNFP39905 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GDNFP39905 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GDNFP39905 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
GDNFP39905 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.52■□□□□ 0.56
GDNFP39905 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 KRT16P3-201ENST00000439127 1283 ntBASIC18.52■□□□□ 0.56
GDNFP39905 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDNFP39905 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
GDNFP39905 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GDNFP39905 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GDNFP39905 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.52■□□□□ 0.55
GDNFP39905 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
GDNFP39905 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.51■□□□□ 0.55
GDNFP39905 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.51■□□□□ 0.55
GDNFP39905 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.51■□□□□ 0.55
GDNFP39905 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
GDNFP39905 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GDNFP39905 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
GDNFP39905 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDNFP39905 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.51■□□□□ 0.55
GDNFP39905 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.5■□□□□ 0.55
GDNFP39905 AC007952.6-201ENST00000573168 2673 ntBASIC18.5■□□□□ 0.55
GDNFP39905 AC003957.1-201ENST00000625108 2673 ntBASIC18.5■□□□□ 0.55
GDNFP39905 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GDNFP39905 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDNFP39905 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GDNFP39905 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GDNFP39905 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GDNFP39905 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDNFP39905 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms