Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YGL214WYGL214W 486 nt3.16□□□□□ -1.9
TDA11P38854 MRPL6YHR147C 645 nt3.16□□□□□ -1.9
TDA11P38854 COS1YNL336W 1146 nt3.16□□□□□ -1.9
TDA11P38854 OXR1YPL196W 822 nt3.16□□□□□ -1.9
TDA11P38854 LCB5YLR260W 2064 nt3.16□□□□□ -1.9
TDA11P38854 SDS23YGL056C 1584 nt3.16□□□□□ -1.9
TDA11P38854 SEC59YMR013C 1560 nt3.16□□□□□ -1.9
TDA11P38854 PMS1YNL082W 2622 nt3.16□□□□□ -1.9
TDA11P38854 PCI8YIL071C 1335 nt3.16□□□□□ -1.9
TDA11P38854 SLM2YNL047C 1971 nt3.15□□□□□ -1.91
TDA11P38854 RRP8YDR083W 1179 nt3.15□□□□□ -1.91
TDA11P38854 YGR161W-CYGR161W-C 279 nt3.15□□□□□ -1.91
TDA11P38854 YIR040CYIR040C 333 nt3.15□□□□□ -1.91
TDA11P38854 YKL091CYKL091C 933 nt3.15□□□□□ -1.91
TDA11P38854 NIT3YLR351C 876 nt3.15□□□□□ -1.91
TDA11P38854 BLS1YLR408C 369 nt3.15□□□□□ -1.91
TDA11P38854 GOT1YMR292W 417 nt3.15□□□□□ -1.91
TDA11P38854 HRT1YOL133W 366 nt3.15□□□□□ -1.91
TDA11P38854 YPR136CYPR136C 513 nt3.15□□□□□ -1.91
TDA11P38854 DRS2YAL026C 4068 nt3.15□□□□□ -1.91
TDA11P38854 RPN2YIL075C 2838 nt3.15□□□□□ -1.91
TDA11P38854 YIG1YPL201C 1386 nt3.14□□□□□ -1.91
TDA11P38854 RAD5YLR032W 3510 nt3.14□□□□□ -1.91
TDA11P38854 GPI13YLL031C 3054 nt3.14□□□□□ -1.91
TDA11P38854 GIS4YML006C 2325 nt3.14□□□□□ -1.91
TDA11P38854 FAS1YKL182W 6156 nt3.14□□□□□ -1.91
TDA11P38854 PCL2YDL127W 927 nt3.14□□□□□ -1.91
TDA11P38854 HIM1YDR317W 1245 nt3.14□□□□□ -1.91
TDA11P38854 DDI2YFL061W 678 nt3.14□□□□□ -1.91
TDA11P38854 ADH4YGL256W 1149 nt3.14□□□□□ -1.91
TDA11P38854 POP6YGR030C 477 nt3.14□□□□□ -1.91
TDA11P38854 DID4YKL002W 699 nt3.14□□□□□ -1.91
TDA11P38854 OCA2YNL056W 594 nt3.14□□□□□ -1.91
TDA11P38854 DDI3YNL335W 678 nt3.14□□□□□ -1.91
TDA11P38854 HUB1YNR032C-A 222 nt3.14□□□□□ -1.91
TDA11P38854 MRPL51YPR100W 423 nt3.14□□□□□ -1.91
TDA11P38854 PIN3YPR154W 648 nt3.14□□□□□ -1.91
TDA11P38854 SIN4YNL236W 2925 nt3.14□□□□□ -1.91
TDA11P38854 DSL1YNL258C 2265 nt3.14□□□□□ -1.91
TDA11P38854 TRM1YDR120C 1713 nt3.13□□□□□ -1.91
TDA11P38854 CTM1YHR109W 1758 nt3.13□□□□□ -1.91
TDA11P38854 FUN30YAL019W 3396 nt3.13□□□□□ -1.91
TDA11P38854 YPL109CYPL109C 1974 nt3.13□□□□□ -1.91
TDA11P38854 KXD1YGL079W 657 nt3.13□□□□□ -1.91
TDA11P38854 LSM1YJL124C 519 nt3.13□□□□□ -1.91
TDA11P38854 ATP12YJL180C 978 nt3.13□□□□□ -1.91
TDA11P38854 RPS28BYLR264W 204 nt3.13□□□□□ -1.91
TDA11P38854 IMP4YNL075W 873 nt3.13□□□□□ -1.91
TDA11P38854 CAF20YOR276W 486 nt3.13□□□□□ -1.91
TDA11P38854 YPR078CYPR078C 1119 nt3.13□□□□□ -1.91
TDA11P38854 HDA2YDR295C 2025 nt3.13□□□□□ -1.91
TDA11P38854 TRE2YOR256C 2430 nt3.13□□□□□ -1.91
TDA11P38854 MSM1YGR171C 1728 nt3.13□□□□□ -1.91
TDA11P38854 CPA2YJR109C 3357 nt3.12□□□□□ -1.91
TDA11P38854 CLN2YPL256C 1638 nt3.12□□□□□ -1.91
TDA11P38854 GCD6YDR211W 2139 nt3.12□□□□□ -1.91
TDA11P38854 AHP1YLR109W 531 nt3.12□□□□□ -1.91
TDA11P38854 PLP2YOR281C 861 nt3.12□□□□□ -1.91
TDA11P38854 AEP2YMR282C 1743 nt3.12□□□□□ -1.91
TDA11P38854 JJJ1YNL227C 1773 nt3.12□□□□□ -1.91
TDA11P38854 TAO3YIL129C 7131 nt3.12□□□□□ -1.91
TDA11P38854 YDR340WYDR340W 303 nt3.11□□□□□ -1.91
TDA11P38854 YFL051CYFL051C 483 nt3.11□□□□□ -1.91
TDA11P38854 YGR026WYGR026W 837 nt3.11□□□□□ -1.91
TDA11P38854 ERP1YAR002C-A 660 nt3.11□□□□□ -1.91
TDA11P38854 YBR053CYBR053C 1077 nt3.11□□□□□ -1.91
TDA11P38854 STE6YKL209C 3873 nt3.11□□□□□ -1.91
TDA11P38854 TOP1YOL006C 2310 nt3.11□□□□□ -1.91
TDA11P38854 STP1YDR463W 1560 nt3.11□□□□□ -1.91
TDA11P38854 PLM2YDR501W 1566 nt3.11□□□□□ -1.91
TDA11P38854 PHO81YGR233C 3537 nt3.11□□□□□ -1.91
TDA11P38854 RSC1YGR056W 2787 nt3.11□□□□□ -1.91
TDA11P38854 ETP1YHL010C 1758 nt3.1□□□□□ -1.91
TDA11P38854 YNR063WYNR063W 1824 nt3.1□□□□□ -1.91
TDA11P38854 ATG13YPR185W 2217 nt3.1□□□□□ -1.91
TDA11P38854 MRPL49YJL096W 486 nt3.1□□□□□ -1.91
TDA11P38854 USB1YLR132C 873 nt3.1□□□□□ -1.91
TDA11P38854 INN1YNL152W 1230 nt3.1□□□□□ -1.91
TDA11P38854 MDJ2YNL328C 441 nt3.1□□□□□ -1.91
TDA11P38854 IZH2YOL002C 954 nt3.1□□□□□ -1.91
TDA11P38854 TAF3YPL011C 1062 nt3.1□□□□□ -1.91
TDA11P38854 GRX1YCL035C 333 nt3.1□□□□□ -1.91
TDA11P38854 SET1YHR119W 3243 nt3.1□□□□□ -1.91
TDA11P38854 DBP7YKR024C 2229 nt3.09□□□□□ -1.91
TDA11P38854 VPS17YOR132W 1656 nt3.09□□□□□ -1.91
TDA11P38854 ESL1YIL151C 3357 nt3.09□□□□□ -1.91
TDA11P38854 YCR015CYCR015C 954 nt3.09□□□□□ -1.91
TDA11P38854 MIX14YDR031W 366 nt3.09□□□□□ -1.91
TDA11P38854 AML1YGR001C 747 nt3.09□□□□□ -1.91
TDA11P38854 SFH1YLR321C 1281 nt3.09□□□□□ -1.91
TDA11P38854 RPL19BYBL027W 570 nt3.09□□□□□ -1.91
TDA11P38854 RAS1YOR101W 930 nt3.09□□□□□ -1.91
TDA11P38854 SUR1YPL057C 1149 nt3.09□□□□□ -1.91
TDA11P38854 ERG9YHR190W 1335 nt3.09□□□□□ -1.91
TDA11P38854 CCT7YJL111W 1653 nt3.08□□□□□ -1.92
TDA11P38854 ISM1YPL040C 3009 nt3.08□□□□□ -1.92
TDA11P38854 IZH1YDR492W 951 nt3.08□□□□□ -1.92
TDA11P38854 RPL1BYGL135W 654 nt3.08□□□□□ -1.92
TDA11P38854 YNL162W-AYNL162W-A 219 nt3.08□□□□□ -1.92
TDA11P38854 RPL1AYPL220W 654 nt3.08□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 32.4 ms