Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCKBRP32239 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCKBRP32239 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.57■□□□□ 0.88
CCKBRP32239 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCKBRP32239 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCKBRP32239 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCKBRP32239 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.56■□□□□ 0.88
CCKBRP32239 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCKBRP32239 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCKBRP32239 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.56■□□□□ 0.88
CCKBRP32239 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCKBRP32239 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.56■□□□□ 0.88
CCKBRP32239 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.56■□□□□ 0.88
CCKBRP32239 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCKBRP32239 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCKBRP32239 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCKBRP32239 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCKBRP32239 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCKBRP32239 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCKBRP32239 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCKBRP32239 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCKBRP32239 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.55■□□□□ 0.88
CCKBRP32239 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.55■□□□□ 0.88
CCKBRP32239 AL034346.1-201ENST00000568244 1277 ntBASIC20.55■□□□□ 0.88
CCKBRP32239 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCKBRP32239 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.55■□□□□ 0.88
CCKBRP32239 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCKBRP32239 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCKBRP32239 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCKBRP32239 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCKBRP32239 AP004607.7-201ENST00000527152 1677 ntBASIC20.54■□□□□ 0.88
CCKBRP32239 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCKBRP32239 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCKBRP32239 SLC29A4P1-201ENST00000398760 971 ntBASIC20.54■□□□□ 0.88
CCKBRP32239 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCKBRP32239 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.54■□□□□ 0.88
CCKBRP32239 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.54■□□□□ 0.88
CCKBRP32239 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.54■□□□□ 0.88
CCKBRP32239 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCKBRP32239 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.53■□□□□ 0.88
CCKBRP32239 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCKBRP32239 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.53■□□□□ 0.88
CCKBRP32239 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCKBRP32239 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
CCKBRP32239 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCKBRP32239 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.53■□□□□ 0.88
CCKBRP32239 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCKBRP32239 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.53■□□□□ 0.88
CCKBRP32239 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.53■□□□□ 0.88
CCKBRP32239 CNN2P6-201ENST00000439038 900 ntBASIC20.53■□□□□ 0.88
CCKBRP32239 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCKBRP32239 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.53■□□□□ 0.88
CCKBRP32239 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCKBRP32239 TMEM191A-211ENST00000637163 1067 ntBASIC20.53■□□□□ 0.88
CCKBRP32239 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCKBRP32239 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCKBRP32239 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCKBRP32239 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCKBRP32239 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCKBRP32239 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCKBRP32239 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCKBRP32239 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.52■□□□□ 0.88
CCKBRP32239 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCKBRP32239 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CCKBRP32239 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCKBRP32239 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.52■□□□□ 0.88
CCKBRP32239 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCKBRP32239 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.52■□□□□ 0.88
CCKBRP32239 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.52■□□□□ 0.88
CCKBRP32239 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.52■□□□□ 0.88
CCKBRP32239 AC010536.3-201ENST00000620306 533 ntBASIC20.52■□□□□ 0.88
CCKBRP32239 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCKBRP32239 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCKBRP32239 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.52■□□□□ 0.87
CCKBRP32239 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCKBRP32239 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCKBRP32239 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCKBRP32239 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCKBRP32239 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCKBRP32239 KRT18P6-201ENST00000555540 1265 ntBASIC20.51■□□□□ 0.87
CCKBRP32239 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.51■□□□□ 0.87
CCKBRP32239 AC133552.2-202ENST00000575694 574 ntBASIC20.51■□□□□ 0.87
CCKBRP32239 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.51■□□□□ 0.87
CCKBRP32239 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCKBRP32239 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCKBRP32239 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCKBRP32239 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCKBRP32239 OR7E47P-201ENST00000546390 1422 ntBASIC20.51■□□□□ 0.87
CCKBRP32239 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.51■□□□□ 0.87
CCKBRP32239 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCKBRP32239 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCKBRP32239 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCKBRP32239 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.5■□□□□ 0.87
CCKBRP32239 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCKBRP32239 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.5■□□□□ 0.87
CCKBRP32239 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCKBRP32239 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCKBRP32239 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCKBRP32239 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCKBRP32239 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms