Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA3P29320 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA3P29320 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA3P29320 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
EPHA3P29320 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
EPHA3P29320 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EPHA3P29320 OR7E47P-201ENST00000546390 1422 ntBASIC20.79■□□□□ 0.92
EPHA3P29320 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.79■□□□□ 0.92
EPHA3P29320 TSPY9P-201ENST00000440215 945 ntBASIC20.79■□□□□ 0.92
EPHA3P29320 TSPY11P-201ENST00000442607 1045 ntBASIC20.79■□□□□ 0.92
EPHA3P29320 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA3P29320 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA3P29320 AL451085.2-201ENST00000605085 799 ntBASIC20.79■□□□□ 0.92
EPHA3P29320 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
EPHA3P29320 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA3P29320 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA3P29320 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.79■□□□□ 0.92
EPHA3P29320 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA3P29320 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA3P29320 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EPHA3P29320 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA3P29320 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
EPHA3P29320 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA3P29320 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.78■□□□□ 0.92
EPHA3P29320 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA3P29320 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA3P29320 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA3P29320 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA3P29320 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.78■□□□□ 0.92
EPHA3P29320 AC104564.3-201ENST00000582367 638 ntBASIC20.78■□□□□ 0.92
EPHA3P29320 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA3P29320 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.78■□□□□ 0.92
EPHA3P29320 AC133637.1-201ENST00000624115 1537 ntBASIC20.78■□□□□ 0.92
EPHA3P29320 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA3P29320 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHA3P29320 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
EPHA3P29320 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
EPHA3P29320 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.77■□□□□ 0.92
EPHA3P29320 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
EPHA3P29320 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.77■□□□□ 0.92
EPHA3P29320 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHA3P29320 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.77■□□□□ 0.91
EPHA3P29320 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA3P29320 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA3P29320 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA3P29320 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.76■□□□□ 0.91
EPHA3P29320 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA3P29320 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA3P29320 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.76■□□□□ 0.91
EPHA3P29320 AC239859.2-201ENST00000444165 318 ntBASIC20.76■□□□□ 0.91
EPHA3P29320 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA3P29320 AL117332.1-201ENST00000622628 974 ntBASIC20.76■□□□□ 0.91
EPHA3P29320 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA3P29320 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHA3P29320 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
EPHA3P29320 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EPHA3P29320 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA3P29320 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA3P29320 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA3P29320 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA3P29320 LINC01521-201ENST00000504184 1943 ntBASIC20.75■□□□□ 0.91
EPHA3P29320 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.75■□□□□ 0.91
EPHA3P29320 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EPHA3P29320 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHA3P29320 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.74■□□□□ 0.91
EPHA3P29320 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA3P29320 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHA3P29320 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA3P29320 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA3P29320 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA3P29320 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA3P29320 AC006455.2-201ENST00000429931 906 ntBASIC20.74■□□□□ 0.91
EPHA3P29320 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA3P29320 AC241377.3-202ENST00000626088 1088 ntBASIC20.74■□□□□ 0.91
EPHA3P29320 AC241585.3-202ENST00000628937 1088 ntBASIC20.74■□□□□ 0.91
EPHA3P29320 AC245100.8-202ENST00000629247 1058 ntBASIC20.74■□□□□ 0.91
EPHA3P29320 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA3P29320 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.74■□□□□ 0.91
EPHA3P29320 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA3P29320 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EPHA3P29320 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
EPHA3P29320 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.73■□□□□ 0.91
EPHA3P29320 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
EPHA3P29320 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHA3P29320 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms